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PLM1_60_b1_redo_sep16_scaffold_1268

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1268_1
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..282)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Streptomyces niveus NCIMB 11891 RepID=V6KLE4_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST33015.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
sig43; ECF subfamily protein RNA polymerase sigma-24 subunit
PLM1_60_b1_redo_sep16_scaffold_1268_2
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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512..889
DNA (378bp) protein (126aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI0003697162
Membrane protein {ECO:0000313|EMBL:KKD02462.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
DoxX family protein
PLM1_60_b1_redo_sep16_scaffold_1268_3
unknown

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973..1068
DNA (96bp) protein (32aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1268_4
unknown

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1065..1235
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1268_5
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1326..1757
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JPS2_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY87210.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_60_b1_redo_sep16_scaffold_1268_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2187..2741)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003648ACD
Uncharacterized protein {ECO:0000313|EMBL:ETK32960.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative membrane protein
PLM1_60_b1_redo_sep16_scaffold_1268_7
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2728..3456)
DNA (729bp) protein (243aa)
hypothetical protein Tax=Humibacter albus RepID=UPI0003B43C7C
Uncharacterized protein {ECO:0000313|EMBL:KJK53914.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1268_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3438..3785)
DNA (348bp) protein (116aa)
PadR family transcriptional regulator Tax=Humibacter albus RepID=UPI0003B77C2B
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEA27261.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_1268_9
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3881..6139
DNA (2259bp) protein (753aa)
hypothetical protein Tax=Humibacter albus RepID=UPI0003B3D22D
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein {ECO:0000313|EMBL:CCQ46005.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
phosphoenolpyruvate synthase
PLM1_60_b1_redo_sep16_scaffold_1268_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6279..7037
DNA (759bp) protein (253aa)
Transposase IS4 family protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FH41_VERMA
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEB42655.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1268_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6991..7563)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003811BC6
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADB32984.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_1268_12
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8262..9923)
DNA (1662bp) protein (554aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00036FACAD
Putative transposase for insertion sequence element {ECO:0000313|EMBL:EGX61540.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
putative transposase for insertion sequence element
PLM1_60_b1_redo_sep16_scaffold_1268_13
Streptomyces sp. MBRL 601, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10676..10942
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WBM2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIX80000.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 601.;"
PLM1_60_b1_redo_sep16_scaffold_1268_14
unknown

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comp(11522..12124)
DNA (603bp) protein (201aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1268_15
unknown

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comp(12198..12464)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003762234
PLM1_60_b1_redo_sep16_scaffold_1268_16
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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12801..13373
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8SBD6_MICSL
hypothetical protein
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65625.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM1_60_b1_redo_sep16_scaffold_1268_17
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13485..13853
DNA (369bp) protein (123aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000378043B
CopY family transcriptional regulator {ECO:0000313|EMBL:CDO08085.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
putative BlaI family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1268_18
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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13850..14710
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AVW4_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83083.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1268_19
unknown

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14727..14987
DNA (261bp) protein (87aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1268_20
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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15608..15856
DNA (249bp) protein (83aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI000371E342
Uncharacterized protein {ECO:0000313|EMBL:EGX61100.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
PLM1_60_b1_redo_sep16_scaffold_1268_21
unknown

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15853..16062
DNA (210bp) protein (70aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1268_22
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(16118..17767)
DNA (1650bp) protein (550aa)
Copper resistance protein CopC Tax=Mycobacterium sp. (strain JLS) RepID=A3Q523_MYCSJ
Copper resistance protein CopC {ECO:0000313|EMBL:AII11276.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
copper resistance protein CopC
PLM1_60_b1_redo_sep16_scaffold_1268_23
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(18107..18925)
DNA (819bp) protein (273aa)
Putative cation-transporting ATPase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YMI1_NOCFA
cation-transporting ATPase
Putative cation-transporting ATPase {ECO:0000313|EMBL:BAD60610.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying 23 items

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