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PLM1_60_b1_redo_sep16_scaffold_1419

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1419_1
unknown

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comp(3..137)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1419_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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413..5224
DNA (4812bp) protein (1604aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Type II secretory pathway pullulanase PulA and related glycosidase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDI8_STRRD
type II secretory pathway pullulanase PulA
PLM1_60_b1_redo_sep16_scaffold_1419_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5306..5944
DNA (639bp) protein (213aa)
MOSC domain-containing protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RNV2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80428.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
MOSC domain containing protein
PLM1_60_b1_redo_sep16_scaffold_1419_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5941..6798)
DNA (858bp) protein (286aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003630249
Uncharacterized protein {ECO:0000313|EMBL:EXG80429.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1419_5
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7103..7687
DNA (585bp) protein (195aa)
metallo-beta-lactamase Tax=Streptomyces acidiscabies RepID=UPI0002893B28
Metallo-beta-lactamase {ECO:0000313|EMBL:EDX23549.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
putative metallo-beta-lactamase
PLM1_60_b1_redo_sep16_scaffold_1419_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8090..8677
DNA (588bp) protein (196aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI000237A779
Uncharacterized protein {ECO:0000313|EMBL:KJK50866.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1419_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8792..9583)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase/isomerase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNU9_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60584.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
enoyl-CoA hydratase/isomerase
PLM1_60_b1_redo_sep16_scaffold_1419_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9710..10867
DNA (1158bp) protein (386aa)
Oxygen-independent coproporphyrinogen III oxidase (Coproporphyrinogenase) (Coprogen oxidase) Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA83_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62024.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
oxygen-independent coproporphyrinogen III oxidase
PLM1_60_b1_redo_sep16_scaffold_1419_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10860..11087)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035D9789
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60585.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1419_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11959..12981
DNA (1023bp) protein (341aa)
HrcA family transcriptional regulator Tax=Salinispora RepID=UPI00037F8B1F
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hrcA; heat-inducible transcription repressor
PLM1_60_b1_redo_sep16_scaffold_1419_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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12989..14116
DNA (1128bp) protein (376aa)
molecular chaperone DnaJ Tax=Salinispora pacifica RepID=UPI00036C2B1A
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
chaperone protein DnaJ
PLM1_60_b1_redo_sep16_scaffold_1419_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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14252..14989
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Ribosomal RNA small subunit methyltransferase E Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NAZ8_KITSK
rsmE; putative ribosomal RNA small subunit methyltransferase E
PLM1_60_b1_redo_sep16_scaffold_1419_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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15585..15929
DNA (345bp) protein (115aa)
Histidine triad (HIT) protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSA7_9ACTO
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AGZ39878.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1419_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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16191..17525
DNA (1335bp) protein (445aa)
Penicillin-binding protein 4 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA76_9ACTO
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EXG80436.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
beta-lactamase
PLM1_60_b1_redo_sep16_scaffold_1419_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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17631..18110
DNA (480bp) protein (160aa)
PhoH family protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F557_VERMA
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:EXG80437.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PhoH family protein
Displaying 15 items

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