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PLM1_60_b1_redo_sep16_scaffold_1422

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1422_1
unknown

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1422_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(319..555)
DNA (237bp) protein (79aa)
Putative transmembrane anti-sigma factor Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7J0_CATAD
transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACU72183.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_1422_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(552..1811)
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PKW4_KRIFD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB32431.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_1422_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1907..2143)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037E91B7
transmembrane anti-sigma factor
Transmembrane anti-sigma factor {ECO:0000313|EMBL:AEK42066.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_1422_5
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2140..2811)
DNA (672bp) protein (224aa)
Putative RNA polymerase ECF-type sigma factor Tax=Nocardia asteroides NBRC 15531 RepID=U5E4N5_NOCAS
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAD81655.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM1_60_b1_redo_sep16_scaffold_1422_6
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3045..3323
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HEP6_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:KHD79185.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1422_7
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3444..3974
DNA (531bp) protein (177aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003777B88
Putative uncharacterized protein {ECO:0000313|EMBL:AAO48279.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis (Streptoverticillium mobaraense).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1422_8
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4061..5446)
DNA (1386bp) protein (462aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4EX35_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH87948.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_1422_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5463..7394)
DNA (1932bp) protein (644aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin (Modular protein) Tax=Modestobacter marinus (strain BC501) RepID=I4EX36_MODMB
peptidase S8 and S53, subtilisin, kexin, sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin (Modular protein) {ECO:0000313|EMBL:CCH87949.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_1422_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7703..8110)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00036924CE
Uncharacterized protein {ECO:0000313|EMBL:CCH18258.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1422_11
unknown

Not on your lists

comp(8363..9421)
DNA (1059bp) protein (353aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1422_12
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9688..10902
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BE74_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90120.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1422_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10930..12153)
DNA (1224bp) protein (408aa)
sulfotransferase Tax=Amycolatopsis alba RepID=UPI0003715111
Uncharacterized protein {ECO:0000313|EMBL:EWM18858.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1422_14
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12169..12969)
DNA (801bp) protein (267aa)
Short chain dehydrogenase Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EWE6_9NOCA
short chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:KIA65823.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
PLM1_60_b1_redo_sep16_scaffold_1422_15
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12995..14164)
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SZ55_AMYOR
Uncharacterized protein {ECO:0000313|EMBL:EWM18857.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1422_16
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14338..15249
DNA (912bp) protein (304aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
Sulfate adenylyltransferase subunit 2 CysD Tax=Rhodococcus equi (strain 103S) RepID=E4WFU6_RHOE1
cysD; sulfate adenylyltransferase subunit 2 cysd
PLM1_60_b1_redo_sep16_scaffold_1422_17
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15249..17093
DNA (1845bp) protein (615aa)
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (EC:2.7.7.4)
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein {ECO:0000313|EMBL:AFU01420.1}; EC=2.7.7.4 {ECO:0000313|EMBL:AFU01420.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
adenylylsulfate kinase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262697F
PLM1_60_b1_redo_sep16_scaffold_1422_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17090..17884
DNA (795bp) protein (265aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000362879D
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:EWM10937.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative alcohol dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_1422_19
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18111..19337
DNA (1227bp) protein (409aa)
transposase IS1533 Tax=Micromonospora sp. CNB394 RepID=UPI000379B475
Transposase IS111A/IS1328/IS1533 {ECO:0000313|EMBL:EFC86218.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
Displaying 19 items

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