ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1478

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1478_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..654
DNA (654bp) protein (218aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036E9CA8
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein {ECO:0000313|EMBL:ACZ84526.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1478_2
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

776..1732
DNA (957bp) protein (319aa)
TRAP transporter solute receptor Tax=Streptomyces sp. Mg1 RepID=B4UYN8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK46406.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1478_3
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1602..3116)
DNA (1515bp) protein (505aa)
Histidine kinase Tax=Streptomyces sp. Mg1 RepID=B4UYN9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK46405.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
integral membrane sensor signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_1478_4
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3124..3789)
DNA (666bp) protein (222aa)
Two component transcriptional regulator Tax=Streptomyces sp. Mg1 RepID=B4UYP0_9ACTO
Two component transcriptional regulator {ECO:0000313|EMBL:EDX20232.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
Two-component system response regulator
PLM1_60_b1_redo_sep16_scaffold_1478_5
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3909..5963
DNA (2055bp) protein (685aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037A2D2E
TRAP transporter, 4TM/12TM fusion protein
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ADB30037.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_1478_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5960..6949
DNA (990bp) protein (330aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035C6DBF
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ADB30038.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_1478_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7031..7684
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AV57_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88708.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1478_8
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7783..8529)
DNA (747bp) protein (249aa)
Peptidase M23 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7G5_GEOOG
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADB73465.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_1478_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8867..9778)
DNA (912bp) protein (304aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003760414
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62106.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1478_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10024..11625
DNA (1602bp) protein (534aa)
ABC transporter related protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SF70_GEOOG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB74760.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_1478_11
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11743..12516
DNA (774bp) protein (258aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036630D6
echA12; enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADI11272.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_1478_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12579..14486
DNA (1908bp) protein (636aa)
ABC transporter related protein Tax=Micromonospora sp. (strain L5) RepID=E8S853_MICSL
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ADL47815.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1478_13
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14492..15547)
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QDT2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN77414.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SC9H11.08; hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1478_14
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15889..16527)
DNA (639bp) protein (213aa)
Serine phosphatase RsbU, regulator of sigma subunit Tax=Rhodococcus sp. EsD8 RepID=N1MD70_9NOCA
Diguanylate Cyclase With GAF Sensor {ECO:0000313|EMBL:CQR59515.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
multi-sensor hybrid histidine kinase
Displaying 14 items

View Taxonomy