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PLM1_60_b1_redo_sep16_scaffold_1537

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1537_1
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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260..748
DNA (489bp) protein (163aa)
deaminase Tax=Streptomyces violaceoniger RepID=UPI0003C75BA0
Deaminase {ECO:0000313|EMBL:KIF77718.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
deaminase-reductase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1537_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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819..1064
DNA (246bp) protein (82aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FHK9_VERMA
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64883.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_1537_3

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comp(1061..3049)
DNA (1989bp) protein (663aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000377E049
Elongation factor Tu GTP binding domain protein {ECO:0000313|EMBL:AIA10470.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tetM; tetracycline resistance protein
PLM1_60_b1_redo_sep16_scaffold_1537_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3250..4221)
DNA (972bp) protein (324aa)
Poly-gamma-glutamate biosynthesis protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3H8_THECD
poly-gamma-glutamate biosynthesis protein
Poly-gamma-glutamate biosynthesis protein {ECO:0000313|EMBL:ACY96103.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1537_5
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4320..4517
DNA (198bp) protein (66aa)
hypothetical protein Tax=Agromyces subbeticus RepID=UPI0003B2E744
Uncharacterized protein {ECO:0000313|EMBL:KGN37218.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1537_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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4616..6289
DNA (1674bp) protein (558aa)
Glycoside hydrolase, family 18 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRY8_ACIC1
glycoside hydrolase family protein
Glycoside hydrolase, family 18 {ECO:0000313|EMBL:ABK52198.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_60_b1_redo_sep16_scaffold_1537_7
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6539..9919)
DNA (3381bp) protein (1127aa)
hypothetical protein Tax=Serinicoccus marinus RepID=UPI0003B56983
Uncharacterized protein {ECO:0000313|EMBL:ERI43375.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1537_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10155..11201)
DNA (1047bp) protein (349aa)
Diguanylate cyclase Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QII5_CATAD
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACU75062.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_1537_9
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11339..11944)
DNA (606bp) protein (202aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034649C4
Putative methyltransferase {ECO:0000313|EMBL:GAD86173.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
methyltransferase type 11
PLM1_60_b1_redo_sep16_scaffold_1537_10
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12046..12567
DNA (522bp) protein (174aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000347720F
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:ELS58892.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
transcriptional regulator, MarR family
PLM1_60_b1_redo_sep16_scaffold_1537_11
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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12637..14241
DNA (1605bp) protein (535aa)
HtpX-like protease (EC:3.4.24.-)
HtpX-like probable protease Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SCE7_ACTS5
HtpX-like protease {ECO:0000313|EMBL:KHD72791.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM1_60_b1_redo_sep16_scaffold_1537_12
unknown

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14231..14470
DNA (240bp) protein (80aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1537_13
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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14619..15512
DNA (894bp) protein (298aa)
Possible dienelactone hydrolase Tax=Rhodococcus RepID=Q0SFT9_RHOSR
Putative hydrolase {ECO:0000313|EMBL:GAF42725.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
dienelactone hydrolase
PLM1_60_b1_redo_sep16_scaffold_1537_14
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(15520..16755)
DNA (1236bp) protein (412aa)
histidine kinase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026285AB
protein serine/threonine phosphatase with GAF(s) sensor(s)
Protein serine/threonine phosphatase with GAF(S) sensor(S) {ECO:0000313|EMBL:AIJ21365.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_1537_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16881..17285)
DNA (405bp) protein (135aa)
HemK family modification methylase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDW5_STRRD
HemK family modification methylase
HemK family modification methylase {ECO:0000313|EMBL:ACZ88207.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Displaying 15 items

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