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PLM1_60_b1_redo_sep16_scaffold_1547

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1547_1
unknown

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2..103
DNA (102bp) protein (34aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1547_2
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(569..1018)
DNA (450bp) protein (150aa)
DNA damage repair protein MutT Tax=Saccharomonospora halophila RepID=UPI000379CFD6
putative nudix hydrolase
Putative nudix hydrolase {ECO:0000313|EMBL:AFU03276.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM1_60_b1_redo_sep16_scaffold_1547_3
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1025..2278)
DNA (1254bp) protein (418aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00035FCC1E
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AFU03277.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM1_60_b1_redo_sep16_scaffold_1547_4
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2275..3267)
DNA (993bp) protein (331aa)
dehydrogenase Tax=Salinispora pacifica RepID=UPI000382D41D
Putative dehydrogenase {ECO:0000313|EMBL:EIE97214.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
putative dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_1547_5
unknown

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comp(3323..4024)
DNA (702bp) protein (234aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00037B27C0
PLM1_60_b1_redo_sep16_scaffold_1547_6
unknown

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comp(4039..4599)
DNA (561bp) protein (187aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1547_7
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4596..4847)
DNA (252bp) protein (84aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00036D5643
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41699.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_1547_8
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5015..5230)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Saccharomonospora glauca K62 RepID=I1CWY8_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EIE97212.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1547_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5353..6516
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI000379E4AD
Putative transcriptional regulator {ECO:0000313|EMBL:EHR48722.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1547_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6523..7251
DNA (729bp) protein (243aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003713B54
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ETK36583.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1547_11

Not on your lists

7913..9799
DNA (1887bp) protein (629aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035E12B6
Uncharacterized protein {ECO:0000313|EMBL:AKA59443.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium AR_412.;"
PLM1_60_b1_redo_sep16_scaffold_1547_12
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10607..12688)
DNA (2082bp) protein (694aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003753E9A
Uncharacterized protein {ECO:0000313|EMBL:KJK33946.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
coagulation factor 5/8 type domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1547_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(13073..13516)
DNA (444bp) protein (148aa)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM1_60_b1_redo_sep16_scaffold_1547_14
unknown

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comp(13470..13625)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1547_15
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13622..14326)
DNA (705bp) protein (235aa)
Hypothetical membrane protein Tax=Rhodococcus opacus (strain B4) RepID=C1AT58_RHOOB
Membrane protein {ECO:0000313|EMBL:KDE14046.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1547_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14382..16049)
DNA (1668bp) protein (556aa)
Transcriptional regulator, LuxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2H7_CONWI
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB52243.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_1547_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16190..17113
DNA (924bp) protein (308aa)
Chemotaxis protein CheR Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W6V9_9ACTO
chemotaxis protein CheR
Chemotaxis protein CheR {ECO:0000313|EMBL:AGZ43720.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1547_18
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17294..17488)
DNA (195bp) protein (65aa)
Putative metal-dependent hydrolase Tax=Frankia alni (strain ACN14a) RepID=Q0RHB8_FRAAA
metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:CAJ63112.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Displaying 18 items

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