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PLM1_60_b1_redo_sep16_scaffold_1662

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1662_1
unknown

Not on your lists

comp(137..385)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1662_2
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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448..1323
DNA (876bp) protein (292aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein Tax=Frankia sp. QA3 RepID=I9KH95_9ACTO
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EIV93500.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
aldo/keto reductase
PLM1_60_b1_redo_sep16_scaffold_1662_3
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1395..2444
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003718E50
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV97828.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_1662_4
Streptomyces rochei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2444..2890
DNA (447bp) protein (149aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036CAFCC
Uncharacterized protein {ECO:0000313|EMBL:BAK19874.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rochei (Streptomyces parvullus).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1662_5
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3189..3593)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036347E6
Putative Regulator protein {ECO:0000313|EMBL:EPH43652.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
Transcriptional regulator, SARP family
PLM1_60_b1_redo_sep16_scaffold_1662_6
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3569..4042)
DNA (474bp) protein (158aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626D1A
Putative ATPase {ECO:0000313|EMBL:EIV96170.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
ATPase-like protein
PLM1_60_b1_redo_sep16_scaffold_1662_7
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4063..5133)
DNA (1071bp) protein (357aa)
transposase ISRSO5, partial Tax=Mycobacterium abscessus RepID=UPI00037E1D33
transposase
ISMsm5, transposase {ECO:0000313|EMBL:EFP56800.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
PLM1_60_b1_redo_sep16_scaffold_1662_8
unknown

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5365..5820
DNA (456bp) protein (152aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1662_9
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5995..9021
DNA (3027bp) protein (1009aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000371CDB3
SARP family transcriptional regulator fused with ATPase domain
SARP family transcriptional regulator fused with ATPase domain {ECO:0000313|EMBL:AEK42579.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_1662_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9071..9820)
DNA (750bp) protein (250aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
Lysozyme M1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RP65_9ACTO
lysozyme
PLM1_60_b1_redo_sep16_scaffold_1662_11
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9831..10310)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QAE8_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD42731.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_1662_12
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10487..11686
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00036855A5
Uncharacterized protein {ECO:0000313|EMBL:GAM48786.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
cytosine deaminase
PLM1_60_b1_redo_sep16_scaffold_1662_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11717..12949)
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JPB7_SACES
LigA protein {ECO:0000313|EMBL:EWM10935.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1662_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13023..14153)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0FYT7_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:CEL20449.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1662_15
unknown

Not on your lists

14438..14578
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1662_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14626..15102
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:EXG79202.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_1662_17
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15158..15631)
DNA (474bp) protein (158aa)
Dual specificity protein phosphatase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWX1_FRADG
dual specificity protein phosphatase
Dual specificity protein phosphatase {ECO:0000313|EMBL:AEH11415.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_1662_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15807..16481
DNA (675bp) protein (225aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI00037E4BF5
DNA-binding response regulator MtrA {ECO:0000313|EMBL:EWM15991.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
Displaying 18 items

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