ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1700

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1700_1
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..2400
DNA (2400bp) protein (800aa)
Putative cation-transporting ATPase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YMN8_NOCFA
Putative cation-transporting ATPase {ECO:0000313|EMBL:BAD60553.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
cation-transporting ATPase
PLM1_60_b1_redo_sep16_scaffold_1700_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2661..2942)
DNA (282bp) protein (94aa)
regulated in copper repressor Tax=Amycolatopsis RepID=UPI0002626DE7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ20400.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_1700_3
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3197..5536)
DNA (2340bp) protein (780aa)
Copper-transporting P-type ATPase {ECO:0000313|EMBL:CCH87063.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CCH87063.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
actP; copper-transporting P-type ATPase (EC:3.6.3.4)
Copper-transporting P-type ATPase Tax=Modestobacter marinus (strain BC501) RepID=I4EUK0_MODMB
PLM1_60_b1_redo_sep16_scaffold_1700_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5597..6613)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZJ6_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV84609.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_1700_5
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6617..6823)
DNA (207bp) protein (69aa)
copper chaperone Tax=Actinomadura atramentaria RepID=UPI000370C1A0
Copper chaperone
Cation-transporting ATPase pacS {ECO:0000313|EMBL:AEV84608.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_1700_6
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7002..8417)
DNA (1416bp) protein (472aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000369D43B
Uncharacterized protein {ECO:0000313|EMBL:KIH97454.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1700_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8414..9286)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037673B5
ATP-binding protein {ECO:0000313|EMBL:KIH97383.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
ABC transporter
PLM1_60_b1_redo_sep16_scaffold_1700_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9339..9977
DNA (639bp) protein (213aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003761F5D
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY96262.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1700_9
unknown

Not on your lists

comp(10009..10230)
DNA (222bp) protein (74aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI0003712213
PLM1_60_b1_redo_sep16_scaffold_1700_10
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10209..10544)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI00035FAA57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOD70047.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
PLM1_60_b1_redo_sep16_scaffold_1700_11
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11117..12034)
DNA (918bp) protein (306aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003764E69
Uncharacterized protein {ECO:0000313|EMBL:KDA40556.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
XRE family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1700_12
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11985..12326)
DNA (342bp) protein (114aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003632DFA
Uncharacterized protein {ECO:0000313|EMBL:KDA40557.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1700_13
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12494..12730)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI00036A3C05
Uncharacterized protein {ECO:0000313|EMBL:KDA40558.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1700_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12945..14255)
DNA (1311bp) protein (437aa)
membrane protein Tax=Catelliglobosispora koreensis RepID=UPI000361662C
citrate transporter
Citrate transporter {ECO:0000313|EMBL:CCH19661.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM1_60_b1_redo_sep16_scaffold_1700_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14252..14695)
DNA (444bp) protein (148aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003698869
putative signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ADB29587.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_1700_16
unknown

Not on your lists

14929..15111
DNA (183bp) protein (61aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1700_17
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15273..15824
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9B9_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91664.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1700_18
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16305..17465)
DNA (1161bp) protein (387aa)
Leu/Ile/Val-binding protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W000_9ACTO
Leu/Ile/Val-binding protein
Leu/Ile/Val-binding protein {ECO:0000313|EMBL:AGZ42352.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1700_19
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17704..17874
DNA (171bp) protein (57aa)
Signaling protein ykoW Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZD0_9ACTO
Signaling protein ykoW
Signaling protein ykoW {ECO:0000313|EMBL:AGZ42353.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 19 items

View Taxonomy