ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1879

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1879_1
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141..1325)
DNA (1185bp) protein (395aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF75_9ACTO
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABW12448.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_1879_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1337..1897
DNA (561bp) protein (187aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000363DDB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98546.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_1879_3
unknown

Not on your lists

1965..2150
DNA (186bp) protein (62aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1879_4
unknown

Not on your lists

2224..2322
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1879_5
unknown

Not on your lists

2319..2423
DNA (105bp) protein (35aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1879_6
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2491..2859
DNA (369bp) protein (123aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00035C10A7
Uncharacterized protein {ECO:0000313|EMBL:EXU91950.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1879_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2856..3350
DNA (495bp) protein (165aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00035FA920
TadE-like protein {ECO:0000313|EMBL:EHR48372.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1879_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3347..3832
DNA (486bp) protein (162aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000363A732
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL49580.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1879_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3849..5321
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI000378165F
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:EHR48369.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
response regulator receiver/SARP domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1879_10
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5297..6988
DNA (1692bp) protein (564aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036D7CD4
transcriptional activator domain-containing protein
Transcriptional activator domain {ECO:0000313|EMBL:ADL45336.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1879_11
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7346..7834)
DNA (489bp) protein (163aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZ89_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV82092.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_1879_12
Acinetobacter sp. ANC 3880, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7839..8870)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Acinetobacter sp. ANC 3880 RepID=N9T8N4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX59997.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3880.;"
PLM1_60_b1_redo_sep16_scaffold_1879_13
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9460..10365)
DNA (906bp) protein (302aa)
AraC family transcriptional regulator Tax=Actinoplanes globisporus RepID=UPI000361C226
Shy25-AraC-family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDR14153.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
PLM1_60_b1_redo_sep16_scaffold_1879_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10522..10827
DNA (306bp) protein (102aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036A9A2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ41330.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1879_15
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10860..11849
DNA (990bp) protein (330aa)
alpha/beta hydrolase Tax=Actinoplanes globisporus RepID=UPI000381B43F
esterase LipW
Esterase LipW {ECO:0000313|EMBL:CCK24666.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_1879_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11852..12142
DNA (291bp) protein (97aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036E4053
Uncharacterized protein {ECO:0000313|EMBL:EXG82039.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
short-chain dehydrogenase/reductase SDR
PLM1_60_b1_redo_sep16_scaffold_1879_17
unknown

Not on your lists

12241..12588
DNA (348bp) protein (116aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1879_18

Not on your lists

12600..13478
DNA (879bp) protein (293aa)
Luciferase family protein Tax=uncultured bacterium RepID=G3EGK1_9BACT
Luciferase family protein {ECO:0000313|EMBL:AEM44247.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
luciferase family protein
PLM1_60_b1_redo_sep16_scaffold_1879_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13765..14595)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003778496
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACU73921.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_1879_20
unknown

Not on your lists

15218..15343
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 20 items

View Taxonomy