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PLM1_60_b1_redo_sep16_scaffold_1887

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1887_1
unknown

Not on your lists

comp(3..215)
DNA (213bp) protein (71aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003647D92
PLM1_60_b1_redo_sep16_scaffold_1887_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(485..1228)
DNA (744bp) protein (248aa)
Esterase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8S6_9ACTO
esterase
Esterase {ECO:0000313|EMBL:AGZ44395.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1887_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1271..1642)
DNA (372bp) protein (124aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003684728
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ38460.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1887_4
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1760..2578
DNA (819bp) protein (273aa)
alpha/beta hydrolase Tax=Salinispora arenicola RepID=UPI00036AC867
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABV98856.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_1887_5
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(2556..2948)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IUC5_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC79696.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
PLM1_60_b1_redo_sep16_scaffold_1887_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3078..5924)
DNA (2847bp) protein (949aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8RY90_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL46170.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1887_7
unknown

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comp(5996..6178)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1887_8
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6350..6787
DNA (438bp) protein (146aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000373CC0C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT62124.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM1_60_b1_redo_sep16_scaffold_1887_9
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(6891..7310)
DNA (420bp) protein (140aa)
Heat shock protein Hsp20 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3U2_THEBD
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ADG89044.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_1887_10
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7434..7667)
DNA (234bp) protein (78aa)
biotin attachment protein Tax=Amycolatopsis benzoatilytica RepID=UPI00036A43D9
biotin/lipoyl attachment domain-containing protein
Biotin attachment protein {ECO:0000313|EMBL:EWT03170.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
PLM1_60_b1_redo_sep16_scaffold_1887_11
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7664..8710)
DNA (1047bp) protein (349aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:ACU97148.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ACU97148.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MWP4_SACVD
PLM1_60_b1_redo_sep16_scaffold_1887_12
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8707..9696)
DNA (990bp) protein (330aa)
acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha Tax=Amycolatopsis benzoatilytica RepID=UPI00037C18E4
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit {ECO:0000313|EMBL:ACU97147.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM1_60_b1_redo_sep16_scaffold_1887_13
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9660..10424)
DNA (765bp) protein (255aa)
Lipoate-protein ligase A Tax=Amycolatopsis mediterranei RepID=D8HRV8_AMYMU
Lipoate--protein ligase {ECO:0000313|EMBL:KDN23746.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
lplA; lipoate-protein ligase A
PLM1_60_b1_redo_sep16_scaffold_1887_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10716..11894)
DNA (1179bp) protein (393aa)
cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000313|EMBL:ACV78927.1}; EC=6.1.1.16 {ECO:0000313|EMBL:ACV78927.1};; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Cysteine--tRNA ligase Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7H4_NAKMY
PLM1_60_b1_redo_sep16_scaffold_1887_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12040..12855)
DNA (816bp) protein (272aa)
ABC transporter related protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACF5_THECD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY99214.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1887_16
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12845..13795)
DNA (951bp) protein (317aa)
ABC transporter permease Tax=Micromonospora sp. CNB394 RepID=UPI000369BA4F
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADL47898.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1887_17
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13836..14735)
DNA (900bp) protein (300aa)
Extracellular solute-binding protein family 3 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGL2_VERMA
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:AEB46347.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1887_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15644..17758
DNA (2115bp) protein (705aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_b1_redo_sep16_scaffold_1887_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(17983..18696)
DNA (714bp) protein (238aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000365CC4F
Carboxyl-terminal protease {ECO:0000313|EMBL:CEL20758.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Periplasmic protease-like protein
Displaying 19 items

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