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PLM1_60_b1_redo_sep16_scaffold_1910

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1910_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1086)
DNA (1086bp) protein (362aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99555.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_1910_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1170..2669)
DNA (1500bp) protein (500aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK36718.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM1_60_b1_redo_sep16_scaffold_1910_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3075..4607)
DNA (1533bp) protein (511aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:AII03216.1}; EC=6.2.1.17 {ECO:0000313|EMBL:AII03216.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
prpE; putative propionate--CoA ligase (EC:6.2.1.17)
Putative propionate--CoA ligase Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZG3_ACIMA
PLM1_60_b1_redo_sep16_scaffold_1910_4
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4604..5509)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Bacillus mycoides Rock1-4 RepID=C3AVR6_BACMY
Putative hydrolase {ECO:0000313|EMBL:GAF43094.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
alpha/beta fold family hydrolase
PLM1_60_b1_redo_sep16_scaffold_1910_5
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5688..6185)
DNA (498bp) protein (166aa)
Putative transcriptional regulator Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D778_SINAD
Putative HxlR family transcriptional regulator {ECO:0000313|EMBL:GAF43099.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1910_6
Burkholderia sp., Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6206..7090)
DNA (885bp) protein (295aa)
Fluoroacetate dehalogenase; EC=3.8.1.3;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.;"
dehH; Haloacetate dehalogenase H-1 (EC:3.8.1.3)
Fluoroacetate dehalogenase Tax=Burkholderia sp. RepID=DEHA_BURSP
PLM1_60_b1_redo_sep16_scaffold_1910_7
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7119..7244)
DNA (126bp) protein (42aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036AC929
Putative enoyl-CoA hydratase echA12 {ECO:0000313|EMBL:EPJ40346.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
PLM1_60_b1_redo_sep16_scaffold_1910_8
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7348..8163)
DNA (816bp) protein (272aa)
Short chain dehydrogenase/reductase family oxidoreductase Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WH16_9ACTO
Oxidoreductase {ECO:0000313|EMBL:KDN73528.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
short chain dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_1910_9
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8273..8896
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family Tax=Streptomyces turgidiscabies Car8 RepID=L7FE45_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ELP68955.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1910_10
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8893..9606
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0IRZ9_MYCSM
Short-chain dehydrogenase {ECO:0000313|EMBL:KHO18190.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
short-chain dehydrogenase of unknown substrate specificity
PLM1_60_b1_redo_sep16_scaffold_1910_11
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9649..10503
DNA (855bp) protein (285aa)
Possible peroxidase (Non-Heme peroxidase) Tax=Janibacter sp. HTCC2649 RepID=A3TRW2_9MICO
Possible peroxidase (Non-Heme peroxidase) {ECO:0000313|EMBL:EAP96977.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
alpha/beta superfamily hydrolase/acyltransferase
PLM1_60_b1_redo_sep16_scaffold_1910_12
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10541..10741
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4MWV2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ40345.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1910_13
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11033..11347
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4MWV2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ40345.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1910_14
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11442..12032
DNA (591bp) protein (197aa)
TetR family transcriptional regulator Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00037FEF7D
TetR family transcriptional regulator {ECO:0000313|EMBL:KFF95079.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1910_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12482..13702
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00035E8BCE
integrase
Integrase family protein {ECO:0000313|EMBL:ACV80773.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_1910_16
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14069..15298
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00037525BB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH56014.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
Displaying 16 items

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