ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1995

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1995_1
unknown

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
Multimodular transpeptidase-transglycosylase
PLM1_60_b1_redo_sep16_scaffold_1995_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(224..2569)
DNA (2346bp) protein (782aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ADB77598.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADB77598.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Peptidoglycan glycosyltransferase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S818_GEOOG
PLM1_60_b1_redo_sep16_scaffold_1995_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3006..3404)
DNA (399bp) protein (133aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035E5BAC
Uncharacterized protein {ECO:0000313|EMBL:KHD74384.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1995_4
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3551..4174
DNA (624bp) protein (208aa)
Transcriptional regulator, PadR-like family Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q019_STANL
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADD45548.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_1995_5
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4194..5273
DNA (1080bp) protein (360aa)
1L-myo-inositol-1-phosphate synthase Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JTE4_STREN
Inositol-3-phosphate synthase {ECO:0000313|EMBL:AJE41539.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
1L-myo-inositol-1-phosphate synthase
PLM1_60_b1_redo_sep16_scaffold_1995_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5471..7204)
DNA (1734bp) protein (578aa)
Xaa-Pro dipeptidyl-peptidase {ECO:0000256|SAAS:SAAS00048444}; EC=3.4.14.11 {ECO:0000256|SAAS:SAAS00048444};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
x-prolyl-dipeptidyl aminopeptidase (EC:3.4.14.11)
Putative Xaa-Pro dipeptidyl-peptidase (PepX) Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6K5_9ACTO
PLM1_60_b1_redo_sep16_scaffold_1995_7
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7407..7907)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000365AD8B
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEE16739.1}; Flags: Precursor;; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
PLM1_60_b1_redo_sep16_scaffold_1995_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8027..8551
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LE29_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHD76459.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1995_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8606..10171
DNA (1566bp) protein (522aa)
Putative slipin regulator Tax=Micromonospora lupini str. Lupac 08 RepID=I0LE30_9ACTO
Putative slipin regulator {ECO:0000313|EMBL:CCH22077.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1995_10
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10333..11658
DNA (1326bp) protein (442aa)
Major Facilitator Superfamily transporter Tax=Modestobacter marinus (strain BC501) RepID=I4F5N2_MODMB
MFS transporter {ECO:0000313|EMBL:KGH48450.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
major facilitator superfamily transporter
PLM1_60_b1_redo_sep16_scaffold_1995_11
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11655..12290
DNA (636bp) protein (212aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035DE901
Uncharacterized protein {ECO:0000313|EMBL:EMF01034.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1995_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12298..13752)
DNA (1455bp) protein (485aa)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5A8_VERMA
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64388.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
PLM1_60_b1_redo_sep16_scaffold_1995_13
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13897..14391
DNA (495bp) protein (165aa)
ADP-ribose pyrophosphatase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RW03_BLASD
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CCG05833.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_60_b1_redo_sep16_scaffold_1995_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14388..14933
DNA (546bp) protein (182aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003602E77
integral membrane protein MviN
Integral membrane protein MviN {ECO:0000313|EMBL:AEB47957.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Displaying 14 items

View Taxonomy