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PLM1_60_b1_redo_sep16_scaffold_8368

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_8368_1
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(359..685)
DNA (327bp) protein (109aa)
Transcriptional regulator, HxlR family Tax=Frankia sp. CN3 RepID=G6HF03_9ACTO
HxlR family transcriptional regulator {ECO:0000313|EMBL:GAM47124.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
ydeP-like transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_8368_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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820..1656
DNA (837bp) protein (279aa)
Putative hydrolase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7A9_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:ETK35324.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative hydrolase
PLM1_60_b1_redo_sep16_scaffold_8368_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1671..2570
DNA (900bp) protein (300aa)
Dienelactone hydrolase Tax=Frankia sp. CN3 RepID=G6HF04_9ACTO
Dienelactone hydrolase {ECO:0000313|EMBL:ETK35325.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_8368_4
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2677..3174
DNA (498bp) protein (166aa)
transposase IS3 Tax=Glaciibacter superstes RepID=UPI0003B6C4ED
Putative transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:EHB55712.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
PLM1_60_b1_redo_sep16_scaffold_8368_5
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3054..4043)
DNA (990bp) protein (330aa)
Probable integrase Tax=Rhizobium loti RepID=M5AMY5_RHILI
Phage integrase family protein {ECO:0000313|EMBL:EUA55841.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare 1956.;"
integrase family protein
PLM1_60_b1_redo_sep16_scaffold_8368_6
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4040..4966)
DNA (927bp) protein (309aa)
Integrase family protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3Z6_9RHIZ
Phage integrase family protein {ECO:0000313|EMBL:EUA55842.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare 1956.;"
Putative integrase/recombinase y4rB
PLM1_60_b1_redo_sep16_scaffold_8368_7
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4963..6147)
DNA (1185bp) protein (395aa)
Phage integrase family protein Tax=Nocardioides sp. CF8 RepID=R7XY57_9ACTO
Integrase {ECO:0000313|EMBL:KKC01556.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
Putative integrase/recombinase y4rA
PLM1_60_b1_redo_sep16_scaffold_8368_8
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6457..7230
DNA (774bp) protein (258aa)
integrase Tax=Glaciibacter superstes RepID=UPI0003B42DEB
Integrase, catalytic region
Integrase, catalytic region {ECO:0000313|EMBL:CCC44437.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
PLM1_60_b1_redo_sep16_scaffold_8368_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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7862..8584
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W7X7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45107.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_8368_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9243..9764
DNA (522bp) protein (174aa)
PadR family transcriptional regulator Tax=Streptomyces RepID=UPI0003768324
PadR family transcriptional regulator {ECO:0000313|EMBL:KHD74244.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Transcriptional regulator, PadR family
PLM1_60_b1_redo_sep16_scaffold_8368_11
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9814..10497
DNA (684bp) protein (228aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI0003665350
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM10089.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
ABC-type transporter
PLM1_60_b1_redo_sep16_scaffold_8368_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10494..12818
DNA (2325bp) protein (775aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI000367ABE7
Uncharacterized protein {ECO:0000313|EMBL:KHD74242.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
Displaying 12 items

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