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PLM1_60_b1_redo_sep16_scaffold_2251

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2251_1
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..788)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00036C3FD6
Serine/threonine protein kinase {ECO:0000313|EMBL:KIF77884.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
Serine/threonine protein kinase
PLM1_60_b1_redo_sep16_scaffold_2251_2
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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833..1387
DNA (555bp) protein (185aa)
Sigma subunit sigma24 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9R1_9ACTO
ECF subfamily RNA polymerase sigma-24
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADG89992.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_2251_3
unknown

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comp(1704..2921)
DNA (1218bp) protein (406aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2251_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3407..3694)
DNA (288bp) protein (96aa)
transposase Tax=Saccharopolyspora spinosa RepID=UPI000237B68A
Transposase {ECO:0000313|EMBL:EKT78877.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_2251_5
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3725..4921)
DNA (1197bp) protein (399aa)
Transposase, IS4 family Tax=Frankia sp. (strain CcI3) RepID=Q2JDS4_FRASC
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:ABD09687.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_2251_6
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5458..5823)
DNA (366bp) protein (122aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003773C23
transposase
Transposase {ECO:0000313|EMBL:AJC60699.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM1_60_b1_redo_sep16_scaffold_2251_7
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6281..9499
DNA (3219bp) protein (1073aa)
hypothetical protein Tax=Agromyces italicus RepID=UPI0003B317E2
Uncharacterized protein {ECO:0000313|EMBL:KJK41253.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
peptidase M14 carboxypeptidase A
PLM1_60_b1_redo_sep16_scaffold_2251_8
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10276..10584)
DNA (309bp) protein (103aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
Ribonuclease VapC Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F8W5_9NOCA
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2251_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(10697..10945)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTI2_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG01840.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_60_b1_redo_sep16_scaffold_2251_10
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11412..11918)
DNA (507bp) protein (169aa)
Putative transposase Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WWC2_CORGT
Uncharacterized protein {ECO:0000313|EMBL:CCH76400.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative transposase
PLM1_60_b1_redo_sep16_scaffold_2251_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(12030..12836)
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW43_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH84426.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
short-chain dehydrogenase/reductase SDR
PLM1_60_b1_redo_sep16_scaffold_2251_12
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13725..13886
DNA (162bp) protein (54aa)
Transposase Tax=Gordonia alkanivorans NBRC 16433 RepID=F9W2S6_9ACTO
Transposase {ECO:0000313|EMBL:GAM49186.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
transposase
Displaying 12 items

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