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PLM1_60_b1_redo_sep16_scaffold_2635

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2635_1
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..870)
DNA (870bp) protein (290aa)
Uncharacterized protein Tax=Rhodococcus opacus (strain B4) RepID=C1BCF9_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH56014.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM1_60_b1_redo_sep16_scaffold_2635_2
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(867..2048)
DNA (1182bp) protein (394aa)
Putative integrase/recombinase Tax=Rhodococcus opacus (strain B4) RepID=C1BCA8_RHOOB
Integrase {ECO:0000313|EMBL:KKC05906.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
putative integrase/recombinase
PLM1_60_b1_redo_sep16_scaffold_2635_3
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2161..2688
DNA (528bp) protein (176aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00037DE169
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS12212.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium indicus pranii MTCC 9506.;"
PLM1_60_b1_redo_sep16_scaffold_2635_4
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2685..3125
DNA (441bp) protein (147aa)
Transposase IS4 family protein Tax=Mycobacterium tusciae JS617 RepID=H1K7A0_9MYCO
Putative transposase {ECO:0000313|EMBL:GAB90009.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
putative transposase
PLM1_60_b1_redo_sep16_scaffold_2635_5
unknown

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3300..3587
DNA (288bp) protein (96aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2635_6
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4393..6252)
DNA (1860bp) protein (620aa)
Acyl-CoA dehydrogenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RIM6_9ACTO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EEP72644.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
acyl-CoA dehydrogenase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_2635_7
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6317..6913
DNA (597bp) protein (199aa)
TetR family transcriptional regulator Tax=Mycobacterium abscessus RepID=R4UTI0_MYCAB
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGM31254.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii 50594.;"
PLM1_60_b1_redo_sep16_scaffold_2635_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6994..7386
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AV59_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88710.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_2635_9
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8054..8578
DNA (525bp) protein (175aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00037FBB1D
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EWM66619.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
RNA polymerase sigma24 factor
PLM1_60_b1_redo_sep16_scaffold_2635_10
unknown

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8645..9253
DNA (609bp) protein (203aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2635_11
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(9839..10426)
DNA (588bp) protein (196aa)
Tax=RBG_16_Actinobacteria_67_15_curated
PLM1_60_b1_redo_sep16_scaffold_2635_12
Gordonia amicalis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10471..11088
DNA (618bp) protein (206aa)
Putative TetR family transcriptional regulator Tax=Gordonia amicalis NBRC 100051 = JCM 11271 RepID=L7KYP3_9ACTO
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAC53631.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amicalis NBRC 100051 = JCM 11271.;"
transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_2635_13
unknown

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comp(11449..11685)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2635_14
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11754..12254
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:CQD05238.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
PLM1_60_b1_redo_sep16_scaffold_2635_15
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12229..12702
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X813_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EFH30667.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
TetR family transcriptional regulator
Displaying 15 items

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