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PLM1_60_b1_redo_sep16_scaffold_2781

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2781_trna_2
unknown

Not on your lists

comp(1061..1134)
DNA (74bp)
transferRNA Pro
PLM1_60_b1_redo_sep16_scaffold_2781_trna_1
unknown

Not on your lists

1251..1321
DNA (71bp)
transferRNA Gly
PLM1_60_b1_redo_sep16_scaffold_2781_1
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1420..1599)
DNA (180bp) protein (60aa)
integrase Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF9C
integrase
Integrase {ECO:0000313|EMBL:KHD78895.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM1_60_b1_redo_sep16_scaffold_2781_2
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1708..2034)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00037A97F0
Uncharacterized protein {ECO:0000313|EMBL:KIE40349.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
integrase
PLM1_60_b1_redo_sep16_scaffold_2781_3
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2340..2666
DNA (327bp) protein (109aa)
Glycosyl transferase Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V4T1_9PSEU
Glycosyl transferase {ECO:0000313|EMBL:EID55134.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
family 2 glycosyl transferase
PLM1_60_b1_redo_sep16_scaffold_2781_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2928..3272
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WCL5_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ46712.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_2781_5
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3206..4519)
DNA (1314bp) protein (438aa)
Transposase IS116/IS110/IS902 family protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SEJ4_INTC7
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ADU46595.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_60_b1_redo_sep16_scaffold_2781_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4935..5549
DNA (615bp) protein (205aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD69_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB53461.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_2781_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5546..6166
DNA (621bp) protein (207aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00038231F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EON23120.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
PLM1_60_b1_redo_sep16_scaffold_2781_8
unknown

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6309..6638
DNA (330bp) protein (110aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2781_9
unknown

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comp(7604..8080)
DNA (477bp) protein (159aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2781_10
unknown

Not on your lists

comp(8077..8232)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2781_11
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8896..9645)
DNA (750bp) protein (250aa)
Lipoprotein Tax=Streptomyces davawensis JCM 4913 RepID=K4QX86_9ACTO
lipoprotein
Lipoprotein {ECO:0000313|EMBL:CCK25440.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_2781_12
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9642..10157)
DNA (516bp) protein (172aa)
Putative RNA polymerase ECF sigma factor Tax=Streptomyces viridochromogenes Tue57 RepID=L8PFA5_STRVR
Putative RNA polymerase ECF sigma factor {ECO:0000313|EMBL:ELS54753.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
RNA polymerase subunit sigma-24
PLM1_60_b1_redo_sep16_scaffold_2781_13
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10430..11215)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Streptomyces sp. FxanaC1 RepID=UPI0003805594
Putative acyltransferase {ECO:0000313|EMBL:EIE97911.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
acetyltransferase (GNAT) family protein
PLM1_60_b1_redo_sep16_scaffold_2781_14
unknown

Not on your lists

comp(11462..11965)
DNA (504bp) protein (168aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2781_15
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12110..12289)
DNA (180bp) protein (60aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E5258
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ACZ23644.1}; species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
Displaying 17 items

View Taxonomy