ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2827

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2827_1
unknown

Not on your lists

1..159
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2827_2
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

298..966
DNA (669bp) protein (223aa)
Transcriptional regulator, HxlR family Tax=Streptomyces turgidiscabies Car8 RepID=L7EUT3_9ACTO
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ELP62614.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
HxlR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_2827_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

973..1695
DNA (723bp) protein (241aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI00037CD079
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS28250.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_60_b1_redo_sep16_scaffold_2827_4
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1777..1908)
DNA (132bp) protein (44aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V0F6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB89303.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2827_5
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2182..3333
DNA (1152bp) protein (384aa)
Putative transposase Tax=Frankia sp. (strain EAN1pec) RepID=A8LAA6_FRASN
putative transposase
Putative transposase {ECO:0000313|EMBL:ABW12308.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_2827_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3424..3747)
DNA (324bp) protein (108aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000382787F
Uncharacterized protein {ECO:0000313|EMBL:ETK30573.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2827_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(3744..4199)
DNA (456bp) protein (152aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA160-J14 RepID=UPI0003645026
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM1_60_b1_redo_sep16_scaffold_2827_8
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4620..5597)
DNA (978bp) protein (326aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036FDDF8
Putative transcriptional regulator {ECO:0000313|EMBL:CAB45044.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis (Nocardia orientalis).;"
ArsR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_2827_9
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

5778..6695
DNA (918bp) protein (306aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003806D55
oxidoreductase
Glr2355 protein {ECO:0000313|EMBL:BAC90296.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM1_60_b1_redo_sep16_scaffold_2827_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6745..7548
DNA (804bp) protein (268aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000371F8F8
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACU74267.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_2827_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7770..9104
DNA (1335bp) protein (445aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7Q7_NAKMY
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:ACV80910.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_2827_12
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9283..9714
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AD10_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY99319.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_2827_13
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9675..10493)
DNA (819bp) protein (273aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C7749E
Uncharacterized protein {ECO:0000313|EMBL:KIZ16113.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2827_14
unknown

Not on your lists

comp(10512..11393)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MQL7_9ACTO
PLM1_60_b1_redo_sep16_scaffold_2827_15
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12254..12904)
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Mycobacterium avium subsp. hominissuis TH135 RepID=T2GX29_MYCAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97591.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_2827_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13105..14028)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PDS7_9ACTO
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50647.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_2827_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14035..14979)
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N6X8_9ACTO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB75235.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_2827_18
unknown

Not on your lists

15033..15272
DNA (240bp) protein (80aa)
PLM1_60_b1_redo_sep16_scaffold_2827_19
unknown

Not on your lists

comp(15256..15375)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 19 items

View Taxonomy