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PLM1_60_b1_redo_sep16_scaffold_174_9

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(10339..11853)

Top 3 Functional Annotations

Value Algorithm Source
Polygalacturonase {ECO:0000313|EMBL:CEL22699.1}; EC=3.2.1.15 {ECO:0000313|EMBL:CEL22699.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 486.0
  • Bit_score: 613
  • Evalue 1.70e-172
Exo-poly-alpha-D-galacturonosidase Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WCB9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 489.0
  • Bit_score: 550
  • Evalue 1.30e-153
carbohydrate binding family 6 similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 509.0
  • Bit_score: 464
  • Evalue 2.00e-128

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
GTGAAGATATCTCCGTTAGCCCTGGCCACGCTGCTGGCCGGTGCTGCCGTTCTGGCGCCCGCCGCACCGGCGCACGCCGCCACGTTCAACGTCCGCAACTACGGCGCCACCGGCAACGGCACGACGATCGACTCGCCCGCGATCGACCGCGCCATCACCGCGGCGAACGCGGCCGGCGGCGGGATCGTCGAGTTCCCCGCCGGCACGTACCACTCCCGTTCGATCCACCTGAAGAGCAACGTCACGCTGCAGCTCAACGCGGGCGCCACGATCAAGGCGGCCAGCAGCGGGATCGACAACCCCGAGCCGAACCCGTACCAGCAGTACCAGGACTTCGGCCACAGCCATTTCCGCAACGCGCTGATCTGGGGCGAGAACGTCACCAACGTCGCCATCACCGGCACCGGCACGATTGACGGCGACGCGCTGGAGCGAGGCGACTCCATGCCGAACGGCAAGGGCGACAAGGCGCTCTCGCTGAAGATGTGCAGCAACGTCACGATCCGGGACGTCACGTTCCGGCGAGGCGTTCACTTCGCGATCCTGATGAACGGGTGCCACGACGTCGCGGTCAACAACCTCAAGATCCTCACGAAGGAGGACCGCGACGGCTTCAACATCATCAACAGCTGGAACGTCGAGGTCACGAACTCCAACATCCAGAGCAGTGACGACGCGATCGGCATCAAGAGCGACTTCGCGATGGGACGGACGTTCGAGAGCCACAACATCCGGATCCGGAACTCGACGATCCACTCCGAGGAGAACAACGCGCTGCAGTTCGGCTCGGAGACGTGCGGCAACTTCCGGGACATCGCCTTCGAGAACCTGAACGTCACCGGCGCCGGCAAGGCGGGCATCGGGATCGTCTCCATGGACGGCGCGACCATCTCGGACATCCGGTACGACAACATCCGGCTGACGAAGACGGCGTCCGCGATCTTCATGAAGATCGGCAGCCGGGGCCGGTGCCCGGGCAAGCCGCCGGCGGGCAAGATCCGCGACATCAGCATCAGCAACGTCACCGGCTCCAACCTGACAACGCCGGCCGACGTCGCCGGGGATGACGAGTACACACCGACGATCGCCGGTGCCGTGGGCGCCCCGATCGAGAACATCCGGCTGACGAACGTGAAGCTGACGCTGCCCGGCGGCCACCCGGCATCCGACGTGAACCGCGTGCCGCCGGAGAACAACGGTGCGTACCCGCCACGGATCTACGGCGTCCGCCCTTCGTACGGCTGGTGGCTGCGGCACGTCCGGGGCGTCGCATTCGTCAACTCCGAGGTGCAGTTCGACCGGAACGACGGCCGGCCGGCGGTCATCGTCGACGACGGCATGGCGATCGCGCTCGACGGCGTCAAGGTCGAGCGGGGCAGCAGCAGCGCGTACGACGTCGGTTTCAAGAGCGTGCGCGGGTACGCGATCGAGAACAGCTCCACGACCACGGGCGCTCCGCTGCGGGTCAACACGTCGAACTCGACGCCGCTGCCGGGCGGTGACCCGACTGGCTGA
PROTEIN sequence
Length: 505
VKISPLALATLLAGAAVLAPAAPAHAATFNVRNYGATGNGTTIDSPAIDRAITAANAAGGGIVEFPAGTYHSRSIHLKSNVTLQLNAGATIKAASSGIDNPEPNPYQQYQDFGHSHFRNALIWGENVTNVAITGTGTIDGDALERGDSMPNGKGDKALSLKMCSNVTIRDVTFRRGVHFAILMNGCHDVAVNNLKILTKEDRDGFNIINSWNVEVTNSNIQSSDDAIGIKSDFAMGRTFESHNIRIRNSTIHSEENNALQFGSETCGNFRDIAFENLNVTGAGKAGIGIVSMDGATISDIRYDNIRLTKTASAIFMKIGSRGRCPGKPPAGKIRDISISNVTGSNLTTPADVAGDDEYTPTIAGAVGAPIENIRLTNVKLTLPGGHPASDVNRVPPENNGAYPPRIYGVRPSYGWWLRHVRGVAFVNSEVQFDRNDGRPAVIVDDGMAIALDGVKVERGSSSAYDVGFKSVRGYAIENSSTTTGAPLRVNTSNSTPLPGGDPTG*