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PLM1_60_b1_redo_sep16_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_174_1
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1216
DNA (1215bp) protein (405aa)
hypothetical protein Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI00035E52AD
Putative CdaR family transcriptional regulator {ECO:0000313|EMBL:KJV00218.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
putative CdaR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_174_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1219..2274
DNA (1056bp) protein (352aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037DA342
Iron oxidase {ECO:0000313|EMBL:ETK32175.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
2OG-Fe(II) oxygenase family oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_174_3
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2264..3283
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Streptomyces sp. PsTaAH-124 RepID=UPI0003619798
peptidase
Peptidase {ECO:0000313|EMBL:AEY85728.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_60_b1_redo_sep16_scaffold_174_4
unknown

Not on your lists

comp(3304..3468)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_174_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3600..5840)
DNA (2241bp) protein (747aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI000383122C
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EWM11463.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_6
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5948..7132
DNA (1185bp) protein (395aa)
Low temperature requirement protein LtrA Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JW77_SACES
Low temperature requirement protein LtrA
Low temperature requirement protein LtrA {ECO:0000313|EMBL:CCH30291.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_174_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7125..9449)
DNA (2325bp) protein (775aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000369FF1B
Glycoside hydrolase {ECO:0000313|EMBL:ETK32669.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
carbohydrate binding family 6
PLM1_60_b1_redo_sep16_scaffold_174_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9848..10339)
DNA (492bp) protein (164aa)
Transcriptional regulator, MerR family Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6V9_THECD
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACY98363.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_174_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10339..11853)
DNA (1515bp) protein (505aa)
Polygalacturonase {ECO:0000313|EMBL:CEL22699.1}; EC=3.2.1.15 {ECO:0000313|EMBL:CEL22699.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Exo-poly-alpha-D-galacturonosidase Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WCB9_9ACTO
carbohydrate binding family 6
PLM1_60_b1_redo_sep16_scaffold_174_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11975..12934)
DNA (960bp) protein (320aa)
Transcriptional regulator, TrmB Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PM50_KRIFD
transcriptional regulator TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ADB34418.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_174_11
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13343..16906
DNA (3564bp) protein (1188aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037A3D18
Peptidase {ECO:0000313|EMBL:KJY19440.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17303..19510
DNA (2208bp) protein (736aa)
hypothetical protein Tax=Longispora albida RepID=UPI000382732D
Uncharacterized protein {ECO:0000313|EMBL:KHD77949.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19768..23727
DNA (3960bp) protein (1320aa)
Alpha-1,2-mannosidase, putative Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASW2_RUBXD
alpha-1,2-mannosidase
Alpha-1,2-mannosidase, putative {ECO:0000313|EMBL:ABG05516.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_60_b1_redo_sep16_scaffold_174_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23779..24777)
DNA (999bp) protein (333aa)
Putative oxidoreductase {ECO:0000313|EMBL:EHN09209.1}; EC=1.6.5.5 {ECO:0000313|EMBL:EHN09209.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Putative oxidoreductase Tax=Patulibacter medicamentivorans RepID=H0EAT7_9ACTN
fadB5; oxidoreductase FadB5
PLM1_60_b1_redo_sep16_scaffold_174_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24891..25460
DNA (570bp) protein (190aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037285D2
Uncharacterized protein {ECO:0000313|EMBL:EWT01266.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_16
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25511..26344)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036ECDFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB44067.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_174_17
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26525..27268)
DNA (744bp) protein (248aa)
Dehydrogenase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L0W8_9ACTO
Dehydrogenase {ECO:0000313|EMBL:CCH17465.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
nuclear export factor GLE1
PLM1_60_b1_redo_sep16_scaffold_174_18
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27344..28297)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WB78_9ACTO
Pecanex-like protein 1 {ECO:0000313|EMBL:KHD75909.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_19
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28818..29933)
DNA (1116bp) protein (372aa)
Secreted protein Tax=Streptomyces sp. C RepID=D9VSQ2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK45711.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30550..31032
DNA (483bp) protein (161aa)
RNA polymerase sigma factor SigL Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W7W5_9ACTO
RNA polymerase sigma factor SigL
RNA polymerase sigma factor SigL {ECO:0000313|EMBL:AGZ45234.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_174_21
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31029..31817
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W7Q8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45233.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_174_22
unknown

Not on your lists

31927..32664
DNA (738bp) protein (246aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_174_23
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33354..34040)
DNA (687bp) protein (229aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K6R5_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH34021.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_174_24
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34308..35282)
DNA (975bp) protein (325aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T3E3_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL45671.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_174_25
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35396..36832
DNA (1437bp) protein (479aa)
Exonuclease RNase T and DNA polymerase III Tax=Isoptericola variabilis (strain 225) PF1_ISOV2">RepID=F6FPF1_ISOV2
Uncharacterized protein {ECO:0000313|EMBL:KGN38943.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
Exonuclease RNase T and DNA polymerase III
PLM1_60_b1_redo_sep16_scaffold_174_26
unknown

Not on your lists

comp(36898..37080)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_174_27
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37521..38372)
DNA (852bp) protein (284aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
HAD family hydrolase Tax=Actinoplanes sp. N902-109 RepID=R4LVL0_9ACTO
otsB; HAD family hydrolase
PLM1_60_b1_redo_sep16_scaffold_174_28
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38583..38762
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PL59_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB34314.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_174_29
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38821..39573
DNA (753bp) protein (251aa)
GntR family transcriptional regulator Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289F32F
GntR family transcriptional regulator {ECO:0000313|EMBL:ETK32072.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_174_30
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39580..40536)
DNA (957bp) protein (319aa)
Dihydrodipicolinate synthetase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CI45_STRBB
dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AHH96891.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Displaying items 1-30 of 36 in total

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