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PLM1_60_b1_redo_sep16_scaffold_175_23

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 20401..20997

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003763A10 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 180.0
  • Bit_score: 282
  • Evalue 2.50e-73
RNA polymerase sigma factor SigE {ECO:0000313|EMBL:KJK48829.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 273
  • Evalue 1.70e-70
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 198.0
  • Bit_score: 271
  • Evalue 1.30e-70

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Taxonomy

Streptomyces sp. NRRL F-4428 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAGTGCAGCAGTGCTGTCGCTTGGGAGGGGGGTGGCGATGACCGACGTTTTCGGCGCCCAGCCGTGGCAGCCGCCCAGCTGGGACGAGGTCGTGCGCACGCACTCCGCACGGGTGTACCGGCTCGCGTTCCGCCTCACCGGCAACCGCGCCGACGCGGAGGACCTCACTCAGGAGGTCTTCGTCCGGGTGTTCCGCGCGCTCGACAGCTACCGCCCCGGCACGTTCGAGGGCTGGCTCCACCGCATCACCACGAACCTCTTCCTCGATCTTGCCCGCCGCCGCGCCCGGATCCGCTTCGAGGCGCTGCCGGAGGACTCCGAGCGGGTGCCGGGCCGTGAACGCAGTCCCGAGCAGGTCTACCACGACGACAACTTGGACGGGGACATCCAGCACGCGCTCGACGCGCTGCCGCCGGACTTCCGTGCCACCGTCGTTCTCTGCGACATCGAGGGCCTCTCGTACGAAGAGATCGCGGCTACGCTAGGCATCAAGCTTGGCACCGTACGTAGTCGAATTCACCGCGGCCGGACCTTGCTGCGAGAGGCGCTCGCACACCGTGCCCCGCGCCAGGCCGGCGGAGAGGCCACGCCATGA
PROTEIN sequence
Length: 199
MSAAVLSLGRGVAMTDVFGAQPWQPPSWDEVVRTHSARVYRLAFRLTGNRADAEDLTQEVFVRVFRALDSYRPGTFEGWLHRITTNLFLDLARRRARIRFEALPEDSERVPGRERSPEQVYHDDNLDGDIQHALDALPPDFRATVVLCDIEGLSYEEIAATLGIKLGTVRSRIHRGRTLLREALAHRAPRQAGGEATP*