ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_175_1
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..809
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PN34_KRIFD
DNA-binding protein {ECO:0000313|EMBL:KGN39436.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_175_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

812..1384
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9S1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45953.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_175_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1475..1999)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLR5_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB32495.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_175_4
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2230..3093)
DNA (864bp) protein (288aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
dihydropteroate synthase Tax=Salinispora arenicola RepID=UPI0003653760
PLM1_60_b1_redo_sep16_scaffold_175_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3170..3616
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LP09_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL21142.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_175_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3621..4130
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KW90_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH15837.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
polyketide cyclase/dehydrase
PLM1_60_b1_redo_sep16_scaffold_175_7
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4127..4693
DNA (567bp) protein (189aa)
DNA-3-methyladenine glycosylase i (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I Tax=Micromonospora sp. (strain L5) RepID=E8RXB4_MICSL
Putative DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:BAL92787.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_175_8
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(4697..5512)
DNA (816bp) protein (272aa)
Rhodanese domain protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE71_THET1
Rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ACZ41227.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM1_60_b1_redo_sep16_scaffold_175_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5602..6393)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase/isomerase Tax=Micromonospora RepID=D9T8U8_MICAI
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADL44225.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_175_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6422..7204)
DNA (783bp) protein (261aa)
hypothetical protein Tax=Longispora albida RepID=UPI000365AD9B
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:CCH15843.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PaaX domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_175_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7472..7639
DNA (168bp) protein (56aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003655AAC
Uncharacterized protein {ECO:0000313|EMBL:ETK31226.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_175_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7763..9274
DNA (1512bp) protein (504aa)
Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Peptidase M17 leucyl aminopeptidase domain protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T8V1_MICAI
peptidase M17 leucyl aminopeptidase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_175_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9350..10633)
DNA (1284bp) protein (428aa)
Urocanate hydratase Tax=Nocardioides sp. CF8 RepID=R7XTA1_9ACTO
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJK42247.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
branched-chain amino acid ABC transporter substrate-binding protein
PLM1_60_b1_redo_sep16_scaffold_175_14
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10663..11763)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037D6E99
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJK42248.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
branched-chain amino acid ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_175_15
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11760..12647)
DNA (888bp) protein (296aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037AC486
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJK42249.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_175_16
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12644..14482)
DNA (1839bp) protein (613aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003715B7F
AMP-binding protein {ECO:0000313|EMBL:KJK42250.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
AMP-binding protein
PLM1_60_b1_redo_sep16_scaffold_175_17
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14556..15347)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036874FB
ABC transporter {ECO:0000313|EMBL:KJK42251.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
livG; branched-chain amino acid ABC transporter, ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_175_18
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15344..16168)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000362B72F
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJK42252.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
branched-chain amino acid ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_175_19
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16550..17665)
DNA (1116bp) protein (372aa)
Glycogen synthase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKZ9_ACTMD
glycogen synthase
Glycogen synthase {ECO:0000313|EMBL:ACU34754.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_175_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17710..18930
DNA (1221bp) protein (407aa)
Glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
glucose-1-phosphate adenylyltransferase Tax=Streptomyces sp. BoleA5 RepID=UPI00036BABB0
PLM1_60_b1_redo_sep16_scaffold_175_21
unknown

Not on your lists

comp(19193..19405)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_175_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19529..19969)
DNA (441bp) protein (147aa)
O-methyltransferase family 3 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8S0_THECD
O-methyltransferase family 3
O-methyltransferase family 3 {ECO:0000313|EMBL:ACY96765.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_175_23
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20401..20997
DNA (597bp) protein (199aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003763A10
RNA polymerase sigma factor SigE {ECO:0000313|EMBL:KJK48829.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
RNA polymerase, sigma subunit, ECF family
PLM1_60_b1_redo_sep16_scaffold_175_24
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20994..21668
DNA (675bp) protein (225aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI0002E93D1F
Membrane protein {ECO:0000313|EMBL:KES04121.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
membrane protein
PLM1_60_b1_redo_sep16_scaffold_175_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21677..22846
DNA (1170bp) protein (390aa)
Putative sigma E regulatory protein, MucB/RseB Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A972_THECD
putative sigma E regulatory protein, MucB/RseB
Putative sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:ACY96768.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_175_26
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22914..25049
DNA (2136bp) protein (712aa)
Peptidase s1 and s6 chymotrypsin/hap Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F249_VERMA
peptidase s1 and s6 chymotrypsin/hap
Peptidase s1 and s6 chymotrypsin/hap {ECO:0000313|EMBL:AEB42738.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_175_27
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25125..25523
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LW04_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL21131.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_175_28
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25536..26672)
DNA (1137bp) protein (379aa)
Antiporter inner membrane protein, mrp homolog Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUG0_BLASD
mrp; Antiporter inner membrane protein, mrp
Antiporter inner membrane protein, mrp homolog {ECO:0000313|EMBL:CCG01925.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_60_b1_redo_sep16_scaffold_175_29
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26795..27268
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family Tax=Frankia sp. CN3 RepID=G6HPH1_9ACTO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFC80399.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
MarR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_175_30
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27382..27876)
DNA (495bp) protein (165aa)
membrane protein Tax=Amycolatopsis nigrescens RepID=UPI00037C1060
Membrane protein {ECO:0000313|EMBL:KDN19324.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
Displaying items 1-30 of 76 in total

View Taxonomy