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PLM1_60_b1_redo_sep16_scaffold_743_2

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(915..1766)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase substrate binding domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 280.0
  • Bit_score: 290
  • Evalue 1.30e-75
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EXG81321.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 270.0
  • Bit_score: 347
  • Evalue 1.30e-92
shikimate dehydrogenase substrate binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 280.0
  • Bit_score: 290
  • Evalue 3.80e-76

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 852
GTGGCCGGCGCCCAATACGGTGAACGGGTGACCGCCTCCCCAGGGCCGCACCGCGCCGCCGTGCTCGGTAGCCCGATCGCGCACTCCCTCTCGCCGGTGCTGCACAACGCCGCGTACACGGCCCTCGGCTTGGACGGCTGGCGGTATACCGCGCACGAGTGCCGCGAGGACGAGCTGCGCGGGTTTATCGCCGGGCTCGATCCGACCTGGGTCGGGCTCTCGCTCACCATGCCGCTCAAGCGTGTCGCGCTCGACATCGCCGATGAGATCTCGGAGCGCGCGGCGGCGATCGGCGCGGCGAACACGCTGATCCTCGGCGACGGTCGCTGCTACGCCGACAACACCGACGCACCCGGCATGGTCGACGCGCTACGGGAAGCTGGCATCACCACCGTCGAGCGGCCCCTGATCATCGGCGCGGGCGGTACGGCGCAGGCCGGCCTTGCGGCGCTGCGGGAACTCGCCGCCGGTCCGGTCACCGTGGTCGTCCGCGAGCCGGCTCGTGCACGTGACCTGGCCGCCACGGCCGAGCGACTGGGCATGGCGATGGAACTGGTGCGATTTACCGAGGTCGAGCCGCTGCTGACGGCCGCCGATCTGATCGTGTCCACGGTGCCGAAGGGGACCGTTGACCGGTTCGCTGCCGTGCCGCTGCGGCCCGGAGCGGTCGTTTTCGACGTCGTGTACGACCCGTGGCCGACGCCGCTGGTGGCCGCCGCCACAGCCGCCGGTTGCCGGGTCGTCTCCGGACTGGACCTGCTGCTGCACCAGGCTGGGCATCAGGTCACGCTCATGACCGGCCGGCCGGCGCCGCTGGCCGCGATGCGCGCCGCGCTCTCCGCCGCCCGGTGA
PROTEIN sequence
Length: 284
VAGAQYGERVTASPGPHRAAVLGSPIAHSLSPVLHNAAYTALGLDGWRYTAHECREDELRGFIAGLDPTWVGLSLTMPLKRVALDIADEISERAAAIGAANTLILGDGRCYADNTDAPGMVDALREAGITTVERPLIIGAGGTAQAGLAALRELAAGPVTVVVREPARARDLAATAERLGMAMELVRFTEVEPLLTAADLIVSTVPKGTVDRFAAVPLRPGAVVFDVVYDPWPTPLVAAATAAGCRVVSGLDLLLHQAGHQVTLMTGRPAPLAAMRAALSAAR*