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PLM1_60_b1_redo_sep16_scaffold_743

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_743_1
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(253..918)
DNA (666bp) protein (222aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Peptidase A24A domain protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WCE5_KINRD
peptidase A24A domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_743_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(915..1766)
DNA (852bp) protein (284aa)
Shikimate dehydrogenase substrate binding domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W0_PSEUX
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EXG81321.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
shikimate dehydrogenase substrate binding domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_743_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1791..2954)
DNA (1164bp) protein (388aa)
Putative aminodeoxychorismate lyase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HEL3_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:EXG81320.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative aminodeoxychorismate lyase
PLM1_60_b1_redo_sep16_scaffold_743_4
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2951..3376)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
Putative Holliday junction resolvase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W913_ACTMD
Holliday junction resolvase YqgF
PLM1_60_b1_redo_sep16_scaffold_743_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3391..6096)
DNA (2706bp) protein (902aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Alanine--tRNA ligase Tax=Micromonospora sp. (strain L5) RepID=E8S1X2_MICSL
alanyl-tRNA synthetase
PLM1_60_b1_redo_sep16_scaffold_743_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6345..6617)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L168_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG81317.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_743_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6617..7066)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037458AE
Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain {ECO:0000313|EMBL:EXG81316.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_743_8
unknown

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comp(7141..7647)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_743_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7644..8981)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000371A1F7
AAA ATPase {ECO:0000313|EMBL:EXG81315.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Replication-associated recombination protein A
PLM1_60_b1_redo_sep16_scaffold_743_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9061..11211
DNA (2151bp) protein (717aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034A087C
Putative RND superfamily drug exporter {ECO:0000313|EMBL:EXG81314.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_743_11
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11568..12596
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H9A9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA60096.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM1_60_b1_redo_sep16_scaffold_743_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12539..13039)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035EE44E
Uncharacterized protein {ECO:0000313|EMBL:KHD78392.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
N-acetyltransferase GCN5
PLM1_60_b1_redo_sep16_scaffold_743_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(13036..14196)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWU4_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU77201.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_743_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14199..15983)
DNA (1785bp) protein (595aa)
Aspartate--tRNA ligase Tax=Micromonospora sp. (strain L5) RepID=E8S1W0_MICSL
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EXG81313.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
aspartyl-tRNA synthetase
PLM1_60_b1_redo_sep16_scaffold_743_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(15980..17239)
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Modestobacter marinus (strain BC501) RepID=I4EZE8_MODMB
PLM1_60_b1_redo_sep16_scaffold_743_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(17236..17985)
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4MP92_9ACTO
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EXG81311.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hydrolase
PLM1_60_b1_redo_sep16_scaffold_743_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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18201..19061
DNA (861bp) protein (287aa)
Peptidyl-prolyl cis-trans isomerase B Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W951_9ACTO
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:EXG81310.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
peptidyl-prolyl cis-trans isomerase B
PLM1_60_b1_redo_sep16_scaffold_743_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(19122..21836)
DNA (2715bp) protein (905aa)
PpGpp synthetase Tax=Actinoplanes sp. N902-109 RepID=R4LRF8_9ACTO
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:EXG81308.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
relA; ppGpp synthetase
PLM1_60_b1_redo_sep16_scaffold_743_19
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(21971..22525)
DNA (555bp) protein (185aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Adenine phosphoribosyltransferase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2I7_VERMA
PLM1_60_b1_redo_sep16_scaffold_743_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(22522..23664)
DNA (1143bp) protein (381aa)
Protein-export membrane protein SecF Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUR5_BLASD
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
secF; protein-export membrane protein secF
PLM1_60_b1_redo_sep16_scaffold_743_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(23667..25196)
DNA (1530bp) protein (510aa)
preprotein translocase subunit SecD Tax=Micromonospora sp. CNB394 RepID=UPI0003656CC2
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
protein-export membrane protein SecD
Displaying 21 items

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