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PLM1_60_b1_redo_sep16_scaffold_348_5

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 5331..6044

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigM Tax=Micromonospora sp. CNB394 RepID=UPI00035C58F8 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 209.0
  • Bit_score: 273
  • Evalue 1.80e-70
sigma-70 family RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 209.0
  • Bit_score: 271
  • Evalue 1.20e-70
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADL49775.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 209.0
  • Bit_score: 271
  • Evalue 5.80e-70

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGCCGCCCGACCTGCCGCAGCACGGCTCCCGACGCACCGCCGCACGTATCGCCGACGGCGCCTCCGAGTTGCCCGACGGGCCGGCGCCGGTGACCGGCCACACCCGCCACGAGACGCCCGACCGGGATCTGTTGTCAGCCCACGCCGCCGGCGACCCGGATGCGTTCGGCGAACTGGTCCGCCGGCACCGGGACAGGCTCTGGGCCGTGGCGCTGCGCACGGTCGGCGACCGGGAAGAGGCCGCCGACGCGCTCCAGGACGCGATGCTCTCGGCGTACCGCGCGGCCGCGGGCTTCCGCGGCGACTCGGCGGTCACTACGTGGCTGCACCGGATCGTCGTCAACGCGTGCCTCGACCGGATCCGCCGCCGGCAGGTGCGCGCCACCGTCCCGCTGCCGGACACCGGGCCAGGTGAGCCCGTCCAGCCCGGCGACCAGATGGCCGACCGAGACACGGCCCTCGTCGTCCACCGCGCGCTCGCCGCGTTGCCGGCGGATCAGCGCGCCGCGCTCGTCCTCGTCGAGCTGCAGGGCCATTCGGTAGCCGAGACCGCCGGGATGCTCGGTGTCGCCGAGGGCACCGTCAAGAGCCGCTGCGCACGCGGTCGGGCCCGGTTGGCGGTGCTCCTCGGCCACCTGCGGAACCCTGACGTGCCCCCGGGCGTCCAACCAGGGCATACGACAGGAAAGGGAGAGCAGGGGGTGATCCAGTGA
PROTEIN sequence
Length: 238
VPPDLPQHGSRRTAARIADGASELPDGPAPVTGHTRHETPDRDLLSAHAAGDPDAFGELVRRHRDRLWAVALRTVGDREEAADALQDAMLSAYRAAAGFRGDSAVTTWLHRIVVNACLDRIRRRQVRATVPLPDTGPGEPVQPGDQMADRDTALVVHRALAALPADQRAALVLVELQGHSVAETAGMLGVAEGTVKSRCARGRARLAVLLGHLRNPDVPPGVQPGHTTGKGEQGVIQ*