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PLM1_60_b1_redo_sep16_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_348_1
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1..1515
DNA (1515bp) protein (505aa)
Integral membrane protein MviN Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5A9_VERMA
integral membrane protein MviN
Integral membrane protein MviN {ECO:0000313|EMBL:AEB47957.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_348_2
unknown

Not on your lists

comp(1523..2089)
DNA (567bp) protein (189aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_348_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2956..3717
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VTZ4_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40282.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_348_4
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3914..5308
DNA (1395bp) protein (465aa)
serine/threonine protein kinase Tax=Salinispora pacifica RepID=UPI00037A3ADC
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64390.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
serine/threonine-protein kinase-like domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_348_5
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5331..6044
DNA (714bp) protein (238aa)
RNA polymerase sigma factor SigM Tax=Micromonospora sp. CNB394 RepID=UPI00035C58F8
sigma-70 family RNA polymerase
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADL49775.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_348_6
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6041..6889
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LXN3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL21706.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_348_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6931..7926
DNA (996bp) protein (332aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
thioredoxin reductase Tax=Salinispora pacifica RepID=UPI000381257C
thioredoxin reductase
PLM1_60_b1_redo_sep16_scaffold_348_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7983..8312
DNA (330bp) protein (110aa)
Thioredoxin Tax=Micromonospora lupini str. Lupac 08 RepID=I0LE37_9ACTO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
thioredoxin
PLM1_60_b1_redo_sep16_scaffold_348_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8520..9680
DNA (1161bp) protein (387aa)
Cell wall hydrolase/autolysin Tax=Micromonospora sp. ATCC 39149 RepID=C4RHL0_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64395.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
cell wall hydrolase/autolysin
PLM1_60_b1_redo_sep16_scaffold_348_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9700..10338)
DNA (639bp) protein (213aa)
N-acetyltransferase GCN5 Tax=Actinomadura flavalba RepID=UPI0003723044
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ETK35039.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_348_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10519..11817
DNA (1299bp) protein (433aa)
Transcriptional regulator with HTH domain and aminotransferase domain, GntR family Tax=Modestobacter marinus (strain BC501) RepID=I4F5P2_MODMB
GntR family transcriptional regulator with HTH domain and aminotransferase domain
Transcriptional regulator with HTH domain and aminotransferase domain, GntR family {ECO:0000313|EMBL:CCH90955.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_348_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11814..12785
DNA (972bp) protein (324aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
D-alanine--D-alanine ligase Tax=Micromonospora sp. ATCC 39149 RepID=C4RHL3_9ACTO
D-alanine--D-alanine ligase
PLM1_60_b1_redo_sep16_scaffold_348_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12829..13467)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036EA09A
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65411.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
N-acetyltransferase GCN5
PLM1_60_b1_redo_sep16_scaffold_348_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13464..14504)
DNA (1041bp) protein (347aa)
Chromosome-partitioning protein parB Tax=Micromonospora lupini str. Lupac 08 RepID=I0LE44_9ACTO
Chromosome-partitioning protein parB {ECO:0000313|EMBL:CCH22091.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
parB-like partition protein
PLM1_60_b1_redo_sep16_scaffold_348_15
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14501..15580)
DNA (1080bp) protein (360aa)
Cobyrinic acid ac-diamide synthase Tax=Micromonospora sp. ATCC 39149 RepID=C4RHL7_9ACTO
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EEP72545.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
cobyrinic acid ac-diamide synthase
PLM1_60_b1_redo_sep16_scaffold_348_16
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16546..17163)
DNA (618bp) protein (206aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
hypothetical protein Tax=Longispora albida RepID=UPI00036402E9
gidB; 16S rRNA methyltransferase GidB
PLM1_60_b1_redo_sep16_scaffold_348_17
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17253..17771)
DNA (519bp) protein (173aa)
single-stranded DNA-binding protein Tax=Frankia sp. Iso899 RepID=UPI0003B5BCBB
Jag {ECO:0000313|EMBL:KGH48462.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
putative RNA-binding protein
PLM1_60_b1_redo_sep16_scaffold_348_18
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17843..18928)
DNA (1086bp) protein (362aa)
60 kDa inner membrane insertion protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5C4_VERMA
60 kDa inner membrane insertion protein
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:AEB47972.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_348_19
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19243..19602)
DNA (360bp) protein (120aa)
Ribonuclease P protein component Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JSG0_STREN
rnpA; Ribonuclease P protein component
Ribonuclease P {ECO:0000313|EMBL:AKH86820.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
PLM1_60_b1_redo_sep16_scaffold_348_20
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19619..19756)
DNA (138bp) protein (46aa)
50S ribosomal protein L34 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F7ZZF1_CELGA
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
PLM1_60_b1_redo_sep16_scaffold_348_21
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20271..21986
DNA (1716bp) protein (572aa)
chromosomal replication initiation protein Tax=Salinispora pacifica RepID=UPI00037A3464
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_348_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22336..23472
DNA (1137bp) protein (379aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta Tax=Streptomyces scabrisporus RepID=UPI000376935F
PLM1_60_b1_redo_sep16_scaffold_348_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23508..24437
DNA (930bp) protein (310aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:EXG78991.1}; EC=1.1.1.44 {ECO:0000313|EMBL:EXG78991.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Putative 6-phosphogluconate dehydrogenase YqeC (EC:1.1.1.-)
6-phosphogluconate dehydrogenase, decarboxylating Tax=Modestobacter marinus (strain BC501) RepID=I4EQ13_MODMB
PLM1_60_b1_redo_sep16_scaffold_348_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24442..25599
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003681BF8
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
recF; recombination protein F
PLM1_60_b1_redo_sep16_scaffold_348_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25589..26191
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GWT8_ACTM4
Putative RNA-binding protein containing Zn ribbon {ECO:0000313|EMBL:EXG78993.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_348_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26545..27801)
DNA (1257bp) protein (419aa)
Putative uncharacterized protein Tax=Streptomyces roseosporus NRRL 15998 RepID=D6AT43_STRFL
Citrate synthase {ECO:0000313|EMBL:EXG78994.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
citrate synthase-like protein
PLM1_60_b1_redo_sep16_scaffold_348_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28501..30438
DNA (1938bp) protein (646aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B Tax=Salinispora arenicola RepID=UPI0003679EC8
PLM1_60_b1_redo_sep16_scaffold_348_28
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


30578..34255
DNA (3678bp) protein (1226aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase, A subunit Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T2Z6_MICAI
PLM1_60_b1_redo_sep16_scaffold_348_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34256..35467
DNA (1212bp) protein (404aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036B31DB
Uncharacterized protein {ECO:0000313|EMBL:EXG79000.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_348_trna_1
unknown

Not on your lists

35518..35591
DNA (74bp)
transferRNA Ile
Displaying items 1-30 of 38 in total

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