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PLM1_60_b1_redo_sep16_scaffold_701_20

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 19191..19454

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 85.0
  • Bit_score: 160
  • Evalue 9.00e-37
DNA-directed RNA polymerase subunit omega Tax=Actinoplanes globisporus RepID=UPI00036F2196 similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 85.0
  • Bit_score: 150
  • Evalue 6.60e-34
rpoZ; putative RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 85.0
  • Bit_score: 149
  • Evalue 2.40e-34

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GTGTCCGGTACTGTCGCCGCTCCCGAGGGCATCACCAACCCCCCCATTGACGAGCTGCTCGAGAAGACCAGCTCCAAGTACGCCCTCGTGATCTACGCGGCCAAGCGCGCGCGCCAGATCAACGCCTACTACAGCCAGCTCGGCGAAGGCCTGCTGGAGTACGTGGGCCCGCTGGTGGAGACCAGCCCGCAGGAGAAGCCGCTCTCGATCGCGCTGCGCGAGATCAACGCCAACCTGCTCACGCACGAGCAGGTCGACAACTGA
PROTEIN sequence
Length: 88
VSGTVAAPEGITNPPIDELLEKTSSKYALVIYAAKRARQINAYYSQLGEGLLEYVGPLVETSPQEKPLSIALREINANLLTHEQVDN*