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PLM1_60_b1_redo_sep16_scaffold_391_21

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 21570..22814

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036C951D similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 414.0
  • Bit_score: 676
  • Evalue 9.70e-192
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EMD29718.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 410.0
  • Bit_score: 610
  • Evalue 1.20e-171
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 412.0
  • Bit_score: 607
  • Evalue 1.60e-171

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
GTGACCGGTAACAACGTCGAGGACCTGCTGCGCCGGCTGGCGCCGCGGGTCCTCGGCACGGTGGTACGACGGTACGGGCATTTCGCCACCGCTGAGGACGCGGTGCAAGAGGCGCTCCTCGCGGCCGCCACGCAGTGGCCAAAGGATGGCATCCCGGACAATCCGCCAGGTTGGCTGATCACTGTCGCCTCGCGCAGGCTGACCGACCTGCTGCGCAGCGAGCAGGCTCGCCAACGCCGTGAAGACACCGTCGCCCGGTGGATACTGCCCGACCAATGGCTGGCGCCCGCCGCCGACCGGCCGGCATCGGAGTCCGATGACACGCTCATCCTGCTGTTCCTGTGTTGCCACCCCTCGCTGTCGCCCGCATCGCAGATCGCGCTCACCTTGCGGGCGGTCGGCGGCTTGACCACCGCCGAGATCGCCCGTGCGTTTCTCGTGCCGGAGGCGACCATGACCCGACGCATCAGCCGGGCCAAGCAGCGCATCAAGGACAGCGGCATTCCGTTCGGCATGCCCCCAGGGTCGGAGCGCACCGAACGGCTAGGCGCGGTTCTCCACGTGCTCTACCTGATCTTCAACGAGGGCTACGCCAGCACGTCTGGGCCGAACCTCCAGCGCAGTGAGCTGGCGGCCGAAGCGATCCGGCTGGCCCGCATGGTCCACCGCCTGCTGCCCGACGACGGCGAGGTGACAGGGCTGCTCGCGCTGATGCTGCTCACCGACGCGCGCCGGCCGGCGCGTACCGGGCCGGATGGCGGGTTGATCCCGATGGCCGAGCAGGATCGAAGCCGCTGGAACGCCGGCTACATCGCTGAGGGCGTGGCGCTCCTCACCGACGCGCTTCCTCGGGGGGCAACTGGCCCGTACCAACTCCAAGCGGCGATCGCCGCGATCCACGACGAAGCGCCAAGCGCCGAGGCGACCGACTGGCCACAGATCATGGCGCTGTATGAGCTTCTGATGCGGATCTCCGATAACCCAATGGTGGCGCTGAACCACGCCGTCGCGGTGGCCATGGTCCGAGGCGCGCACGCGGGGCTTGATCTGCTCGGAAAGCTCGATGCCGATCAGCGGATCGCCGGGGACCACCGGCTCCACGCGGTCCGCGCGCACCTGCTGGAGATGGCCGGTGATCGCGTGGCAGCGCGCGACTCTTACGAAGCGGCGGCCGGGCGAACAACGAGCCTTCCGCAACAGCGTTACCTCCACGCCCGAGCCGCCCGCCTGACAGACGACCAGTGA
PROTEIN sequence
Length: 415
VTGNNVEDLLRRLAPRVLGTVVRRYGHFATAEDAVQEALLAAATQWPKDGIPDNPPGWLITVASRRLTDLLRSEQARQRREDTVARWILPDQWLAPAADRPASESDDTLILLFLCCHPSLSPASQIALTLRAVGGLTTAEIARAFLVPEATMTRRISRAKQRIKDSGIPFGMPPGSERTERLGAVLHVLYLIFNEGYASTSGPNLQRSELAAEAIRLARMVHRLLPDDGEVTGLLALMLLTDARRPARTGPDGGLIPMAEQDRSRWNAGYIAEGVALLTDALPRGATGPYQLQAAIAAIHDEAPSAEATDWPQIMALYELLMRISDNPMVALNHAVAVAMVRGAHAGLDLLGKLDADQRIAGDHRLHAVRAHLLEMAGDRVAARDSYEAAAGRTTSLPQQRYLHARAARLTDDQ*