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PLM1_60_b1_redo_sep16_scaffold_391

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_391_1
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135..473)
DNA (339bp) protein (113aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00037A5C85
thymidylate kinase
PLM1_60_b1_redo_sep16_scaffold_391_2
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(488..1099)
DNA (612bp) protein (204aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003668DA9
Uncharacterized protein {ECO:0000313|EMBL:KDA40554.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
DNA polymerase III subunit epsilon
PLM1_60_b1_redo_sep16_scaffold_391_3
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1096..2250)
DNA (1155bp) protein (385aa)
radical SAM protein Tax=Actinokineospora enzanensis RepID=UPI00037EF3FB
DNA repair photolyase {ECO:0000313|EMBL:KDA40555.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_391_4
unknown

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comp(2526..2798)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_391_5
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3445..4812
DNA (1368bp) protein (456aa)
Uncharacterized protein Tax=Saccharomonospora marina XMU15 RepID=H5X705_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR53473.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_391_6
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4769..5854)
DNA (1086bp) protein (362aa)
NAD-dependent epimerase/dehydratase Tax=Frankia sp. (strain CcI3) RepID=Q2JBD3_FRASC
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KDA41274.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
NAD-dependent epimerase/dehydratase
PLM1_60_b1_redo_sep16_scaffold_391_7
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5929..7077
DNA (1149bp) protein (383aa)
Putative peptidase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YX17_NOCFA
peptidase
Putative peptidase {ECO:0000313|EMBL:BAD57274.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM1_60_b1_redo_sep16_scaffold_391_8
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8003..8512
DNA (510bp) protein (170aa)
CRISPR-associated helicase Cas3 Tax=Frankia sp. EUN1f RepID=D3D4D2_9ACTO
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:EFC82265.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated helicase Cas3 family protein
PLM1_60_b1_redo_sep16_scaffold_391_9
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8496..10808
DNA (2313bp) protein (771aa)
CRISPR-associated helicase, Cas3 family Tax=Thermobifida fusca (strain YX) RepID=Q47PJ0_THEFY
CRISPR-associated helicase Cas3 family protein
CRISPR-associated helicase, Cas3 family {ECO:0000313|EMBL:AAZ55629.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM1_60_b1_redo_sep16_scaffold_391_10
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10839..12377
DNA (1539bp) protein (513aa)
CRISPR-associated protein, Cse1 family Tax=Frankia sp. EUN1f RepID=D3D4D0_9ACTO
CRISPR-associated protein, Cse1 family {ECO:0000313|EMBL:EFC82263.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated Cse1 family protein
PLM1_60_b1_redo_sep16_scaffold_391_11
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12374..13093
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Thermobifida fusca RepID=R9FEW7_THEFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ55627.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM1_60_b1_redo_sep16_scaffold_391_12
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13090..14229
DNA (1140bp) protein (380aa)
CRISPR-associated protein, Cse4 family Tax=Frankia sp. EUN1f RepID=D3D4C8_9ACTO
CRISPR-associated protein, Cse4 family {ECO:0000313|EMBL:EFC82261.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated Cse4 family protein
PLM1_60_b1_redo_sep16_scaffold_391_13
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14226..14984
DNA (759bp) protein (253aa)
CRISPR-associated protein Cas5 family Tax=Frankia sp. EUN1f RepID=D3D4C7_9ACTO
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:EFC82260.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated Cas5e family protein
PLM1_60_b1_redo_sep16_scaffold_391_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14981..15625
DNA (645bp) protein (215aa)
CRISPR-associated protein, Cse3 family Tax=Frankia sp. EUN1f RepID=D3D4C6_9ACTO
CRISPR-associated protein, Cse3 family {ECO:0000313|EMBL:EFC82259.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated Cse3 family protein
PLM1_60_b1_redo_sep16_scaffold_391_15
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15622..16629
DNA (1008bp) protein (336aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated endonuclease Cas1 Tax=Frankia sp. EUN1f RepID=D3D4C5_9ACTO
CRISPR-associated Cas1 family protein
PLM1_60_b1_redo_sep16_scaffold_391_16
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16634..16939
DNA (306bp) protein (102aa)
CRISPR-associated protein Cas2 Tax=Frankia sp. EUN1f RepID=D3D4C4_9ACTO
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:EFC82257.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
CRISPR-associated protein Cas2
PLM1_60_b1_redo_sep16_scaffold_391_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17301..18353)
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Frankia sp. EUN1f RepID=UPI0001C462F6
Uncharacterized protein {ECO:0000313|EMBL:CCF85953.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_391_18
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(18597..19709)
DNA (1113bp) protein (371aa)
Uncharacterized protein Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L6P6_NOCAA
Uncharacterized protein {ECO:0000313|EMBL:EYB69783.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_391_19
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19899..20960
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000364C7AD
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:AEK42141.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_391_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21145..21561
DNA (417bp) protein (139aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035FBC68
Uncharacterized protein {ECO:0000313|EMBL:CCH18477.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_391_21
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21570..22814
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036C951D
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EMD29718.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
putative ECF subfamily RNA polymerase sigma-24 subunit
PLM1_60_b1_redo_sep16_scaffold_391_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23084..23797)
DNA (714bp) protein (238aa)
Bifunctional DNA primase/polymerase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T895_MICAI
Uncharacterized protein {ECO:0000313|EMBL:EXG79119.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
bifunctional DNA primase/polymerase
PLM1_60_b1_redo_sep16_scaffold_391_23
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24285..27239
DNA (2955bp) protein (985aa)
Alpha-L-fucosidase/alpha-galactosidase Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XW07_9PSEU
alpha-L-fucosidase
Alpha-L-fucosidase {ECO:0000313|EMBL:AIG75664.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM1_60_b1_redo_sep16_scaffold_391_24
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27252..28952
DNA (1701bp) protein (567aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5UTC1_STRCU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS70383.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM1_60_b1_redo_sep16_scaffold_391_25
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29156..30499)
DNA (1344bp) protein (448aa)
Putative ABC transporter substrate-binding protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2W9_9ACTO
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE {ECO:0000313|EMBL:CEL14501.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
putative ABC transporter substrate-binding protein
PLM1_60_b1_redo_sep16_scaffold_391_26
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30492..32462)
DNA (1971bp) protein (657aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2M3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43478.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_391_27
unknown

Not on your lists

32782..33186
DNA (405bp) protein (135aa)
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_391_28
unknown

Not on your lists

33424..33915
DNA (492bp) protein (164aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_391_29
unknown

Not on your lists

33990..34133
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_391_30
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34144..34683
DNA (540bp) protein (180aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037365D6
Uncharacterized protein {ECO:0000313|EMBL:EPD68726.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
GCN5-like N-acetyltransferase
Displaying 30 items

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