ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_998_5

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(1832..3094)

Top 3 Functional Annotations

Value Algorithm Source
glycine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 420.0
  • Bit_score: 703
  • Evalue 2.80e-200
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 420.0
  • Bit_score: 703
  • Evalue 1.40e-199
Serine hydroxymethyltransferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5Y8_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 420.0
  • Bit_score: 703
  • Evalue 9.80e-200

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGACGACGCCGTTCTGGGGACCCGACTTCGACGCCCTGCAGGCCCAGGATCCGGAGATTGCCGACGTGGTCCTCGGGGAGCTGGAGCGGCTGCGCGGCGGCTTGCAGCTGATCGCGAGCGAGAACTTCACGTCGCCGGCGGTGCTGGCCGCGCTGGGCAGCACGCTGTCGAACAAGTACGCCGAGGGGTACCCGGGCAAGCGCTACTACGGCGGTTGCGTCGAGGTCGACAAGGCCGAGGAGCTGGGCCGGGAGCGCGCGAAGCAGCTGTTCGGCGCCGACCACGCCAACCTCCAGCCGCACTCGGGCGCCAGCGCCAACCTGGCCGCCTACGCCGCGCTGCTGGTCCCCGGTGACACCGTGTTGGCGCTGTCGCTGCCGCACGGCGGCCACCTCACGCACGGCAGCAAGGTGAACTTTTCCGGCAAGTGGTTCAACACGATCGGGTACTCGGTCCGTGCGGACAACGAGCTGATCGACTACGACGAGGTGCGCGCGCTGGCCCGCGAGCACCGGCCGAAGATGATCATCTGCGGCGCCACCGCATACCCGCGCCTCATCGACTTCGCCGCGTTCCGCGAGATCGCCGACGAGGTCGGTGCCTGGCTGATGGTCGACGCCGCGCACTTCATCGGGCTGGTGGCCGGCAAGGCAATCCCGTCGCCGGTGCCGTACGCCGACGTCGTCTGCTTCACCACGCACAAGGTGCTGCGCGGCCCGCGTGGCGGCATGATCCTCTGCAAGGAGGAGTTGGCCCAGAAGATCGACAAGGCCGTGTTCCCGTTCAGCCAGGGCGGCCCGCTCATGCACTCGGTCGCGGCGAAGGCCGTGGCGCTGCGCGAGGCGCTCCAGCCCAGCTACCAGGCGTACGCCAAGCAGGTGATCGCCAACGCACAGTCGCTCGCCGAGGGGCTGGCCGCCGAGGGCATGCGTCCGGTGTCCGGCGGCACCGACACCCACCTCGCCCTGATCGACCTGCGCGAGGTCGGCGTCACCGGTGCCGAGGCCGAGGCCCGCGCGGACGCGGCGAAGATCACGCTGAACAAGAACGCCATCCCGTACGACCCGCAGAAGCCGATGATCGCTTCCGGCATCCGGGTCGGCACGCCGAGCGTCACGACGCAGGGCATGGTCGAGGGCGACATGAAGGAGATCGCGTCGCTGATCGGCCGGGCCGTGCGCGACGCCGACGGCAGCGCCGCTGCCGAGATCGGTGCGGCGGTGGGCGCGCTCGTGGCACGCCACCCGGCGTACCCGCGCTGA
PROTEIN sequence
Length: 421
MTTPFWGPDFDALQAQDPEIADVVLGELERLRGGLQLIASENFTSPAVLAALGSTLSNKYAEGYPGKRYYGGCVEVDKAEELGRERAKQLFGADHANLQPHSGASANLAAYAALLVPGDTVLALSLPHGGHLTHGSKVNFSGKWFNTIGYSVRADNELIDYDEVRALAREHRPKMIICGATAYPRLIDFAAFREIADEVGAWLMVDAAHFIGLVAGKAIPSPVPYADVVCFTTHKVLRGPRGGMILCKEELAQKIDKAVFPFSQGGPLMHSVAAKAVALREALQPSYQAYAKQVIANAQSLAEGLAAEGMRPVSGGTDTHLALIDLREVGVTGAEAEARADAAKITLNKNAIPYDPQKPMIASGIRVGTPSVTTQGMVEGDMKEIASLIGRAVRDADGSAAAEIGAAVGALVARHPAYPR*