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PLM1_60_b1_redo_sep16_scaffold_998_13

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(9290..11407)

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor rho (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 737.0
  • Bit_score: 874
  • Evalue 2.00e-251
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 737.0
  • Bit_score: 874
  • Evalue 9.80e-251
Transcription termination factor Rho Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJ19_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 737.0
  • Bit_score: 874
  • Evalue 7.00e-251

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Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
TTGAGCGACACCACCAACATCGCGTCCGAGGCGCAGGACAACGCGCCCGAGACCGCGAGCTCCGCGGAGACCACTAAGCCCAGGCGGCGTGCCGCCGGCGGCGGGCTCTCCGCCATGCTCCTCCCTGAGCTGCAGAAACTCGCCGGCGAGATGAGCATCAGCGGCATCGGGCGCATGCGCAAGGGCGAGCTGATCGCCGCGATCCAGGCCAAGCAGGGCGGCGGTGCCACCGCGGCCGTGTCCGTCCCCGCGCCCCGCGCGGAGCAGTTGGCCGAGCAGGTCGCGCTCCCGGTCGGTGCGGCGGGCGAGAGCACGGAGACCGCCGAGACCGCCGAACCGGCCGCGCGTACCAGCCGTCGCCGCGCCAGCCGTCCGGCCGGTGCGCCGGAGGGCGCCGTCGCCGCGGCTGACACTGCCACCGCCGTGGTAGCGGAGACGCTGACCGCGGAGCCCGCTGCCGCCGAGCAGCCGTCCGCCGACGCCACGCCGACGACCGAGCGCCCCCAGGGCGAGCGGGGCGACCGTCAGCAGGGCGACCGCAACCAGAACCGCGACCAGCGCGACCAAGGCGACCGCCAGCAGGGCGGCCGTGACCAGGGCGACCGCCAGCAGGGCGAGCGCACCCGCGACCGTAACCAGGGCGACCGCCAGCAGGGTGACCGGGACCGGTCCGACCGCGGCGGCCGTGGCCAGGGCGGCGAGCGCGGTCAGGGCGGTGACCGGCAGCAGGGCGACCGGCAGCAGGGCGACCGCCAGCAGGGCGACCGCAACCAGAACCGGGACCAGAACCGTGACCAGAACCGTGACCAGGGCGGCCAGAACCGCGACCAGGGCCGGGACCAGGGCGGTCAGCGCGACCAGGACGACGACGGTGACGGCAGCGGTCGCCGCCGCCGGGGCCGGTTCCGGGAGCGGAACCGGCGCGGCCGTGACAGTGGTGGCCGCGAGCGCTTCGACAACGCGGAGCCCGTGGTCGCTGAGGACGACGTCCTGATCCCCGTCGCGGGCATCGTGGACATCCTCGACAACTACGCGTTCATCCGGACCTCCGGCTACCTGACCGGGCCGAACGATGTCTACGTCTCGCTGTCGCAGATCCGGAAGAACGGCCTGCGCCGCGGTGACGCCGTCACTGGCGCCGTACGCCAGCCGCGTGAGGGCGAGCGCCGCGACAAGTACAACGCGCTGGTCCGGCTGGACACCGTGAACGGCCAGGAGCCCGAGTCGGCGCGTAACCGCCCCGAGTTCCACAAGCTCACGCCGCTCTACCCGCAGGACCGCCTGCGGCTGGAGACCGAGCCGAACATCCTCACCACCCGGGTCATCGACCTGGTGATGCCGATCGGCAAGGGTCAGCGCGCGCTCATCGTCAGCCCGCCGAAGGCCGGTAAGACGATGGTGCTGCAGGCCATCGCCAACGCGATCACCACGAACAACCCCGAGTGCCACCTCATGGTCGTCCTCGTCGACGAGCGGCCCGAAGAGGTCACCGACATGCAGCGCTCGGTGAAGGGTGAGGTCATCGCCTCCACCTTCGACCGGCCGCCGTCGGACCACACCACGGTCGCCGAGCTCTCCATTGAGCGGGCGAAGCGTCTGGTCGAGCTGGGCCACGACGTCGTGGTGCTGCTCGACTCGATCACCCGTCTCGGCCGGGCCTACAACCTGGCCGCGCCGGCGAGCGGGCGCATCCTCTCCGGTGGCGTCGACTCCACCGCCCTGTACCCGCCGAAGCGGTTCCTGGGCGCGGCGCGCAACATCGAGAACGGCGGTTCGCTCACCATCCTCGCCACCGCGCTGGTCGAGACGGGTTCGACCATGGACACCGTCATCTTCGAGGAGTTCAAGGGCACCGGTAACGCGGAGCTCAAGCTCGACCGGAAGCTCGCCGACAAGCGGATCTTCCCGGCGATCGACGTCGACCCGTCCGGCACGCGTAAGGAAGAGATCCTGCTCGCGCCGGAAGAGCTCCAGATCGTGCATAAGCTGCGCCGGGTGCTGCACGCGCTCGACTCGCAGCAGGCGCTGGAGCTGCTGCTGGACAAGATCAAGAAGACCTCGACGAACGTCGAGTTCCTCATGCAGATCCAGAAGACGACGGTCGGCCCGACCGAGTAG
PROTEIN sequence
Length: 706
LSDTTNIASEAQDNAPETASSAETTKPRRRAAGGGLSAMLLPELQKLAGEMSISGIGRMRKGELIAAIQAKQGGGATAAVSVPAPRAEQLAEQVALPVGAAGESTETAETAEPAARTSRRRASRPAGAPEGAVAAADTATAVVAETLTAEPAAAEQPSADATPTTERPQGERGDRQQGDRNQNRDQRDQGDRQQGGRDQGDRQQGERTRDRNQGDRQQGDRDRSDRGGRGQGGERGQGGDRQQGDRQQGDRQQGDRNQNRDQNRDQNRDQGGQNRDQGRDQGGQRDQDDDGDGSGRRRRGRFRERNRRGRDSGGRERFDNAEPVVAEDDVLIPVAGIVDILDNYAFIRTSGYLTGPNDVYVSLSQIRKNGLRRGDAVTGAVRQPREGERRDKYNALVRLDTVNGQEPESARNRPEFHKLTPLYPQDRLRLETEPNILTTRVIDLVMPIGKGQRALIVSPPKAGKTMVLQAIANAITTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTTVAELSIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTILATALVETGSTMDTVIFEEFKGTGNAELKLDRKLADKRIFPAIDVDPSGTRKEEILLAPEELQIVHKLRRVLHALDSQQALELLLDKIKKTSTNVEFLMQIQKTTVGPTE*