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PLM1_60_b1_redo_sep16_scaffold_998_19

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(16552..17892)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 448.0
  • Bit_score: 636
  • Evalue 2.90e-179
diaminopimelate decarboxylase Tax=Streptomyces scabrisporus RepID=UPI000372E7C1 similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 449.0
  • Bit_score: 643
  • Evalue 1.30e-181
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 448.0
  • Bit_score: 627
  • Evalue 2.00e-177

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Taxonomy

Streptomyces rimosus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGCCGTCCGGCCTCCTCGCGCCGCCGGCTGCCGACCTCGCCGCGATCGACCCCCGCATCTGGCCGATCAGCGCGAGTCGCGTCGACGGGGTGCTGCACCTCGCCGGCATGGACGTGCGCGACCTGGCGGCCGAGTACGGCACGCCCGCGCTCTTCCTCGACGAGACCGACTTCCGCACCCGGTGCCGGGGGTACGCGGGCGCGTTCGAGGGCGCCGACGTGTTCTACGCCGGCAAGGCGTTCCTCTCCAAGGCCGTCGCGCGCTGGGTCGCGGAGGAGGGCCTGGGCCTCGATGTCTGCACGGGCGGCGAGCTTGCGGTGGCGTTGGCCGCGGGATTCCCGCCCGCGCGGCTCGCGTTGCACGGCAACAACAAGAGCGTCACGGAGCTGCGGCGTGCGCTGGAGGTCGGCGTCGGGTACGTCGTGCTCGACTCATTCACCGAGATCGCGCGCCTGGCCGATCTCGCTGCCGAGACGGGGGTCCGCCCGCGGGTGATGGTGCGGGTCACGGTCGGCGTCGAGGCGCACACGCACGAGTTCATCGCCACCGCGCACGAGGACCAGAAGTTCGGCTTCTCGCTCTCCTCCGGGGCAGCCGCCGAGGCCGTGCGACGGGTGCTCAAGCACTCCAGCCTGGAGCTGGCCGGACTGCACAGCCACATCGGATCGCAGATCTTCGACACGTCCGGCTTCGAGGTGTCGGCGCACCGGCTCGTCGGGCTCCTCACCGAGATCCGCAATGAGCACGGCATCGAGCTGCCCGAGCTGGATCTCGGCGGCGGCCTGGGCATCGCGTACACGCCTGACGACGATCCCGCCGAAGTGAGCGTCGTGGCCGCCGAGCTGCGCCAGATCGTCCAGCGCGAGTGCAGGGGCGCCGGCCTCACCGTGCCCCGGTTGTCAGTTGAGCCCGGCCGCGCGCTCGTCGGCCAGGCGGGCGTCACGCTGTACGAGGTCGGCACCGTCAAGGACGTCGACGGGCTCCGCACGTACGTCAGCATCGACGGCGGCATGAGCGACAACATCCGCGCGGCGCTCTACGACGCCGCGTACACGTGCGTGCTGGCGTCCCGGGCGTCGGATGCGCCGCCTATGCTCGCGCGGGTCGTCGGCCGGCACTGCGAAAGCGGCGACGTGGTGGTGAAGGACGTCTGGCTCCCGGCCGACGTCGTCCCGGGCGACCTGCTGGCCGTCGCCGGCACGGGCGCCTACTGCCGCAGCATGGCGAGCAACTACAACCACACGCCACGGCCACCGGTCGTCGGCGTCCTCGACGGGGCGAGCCGGGTGCTGGTGCGCCGGGAGACGGAGGACGACCTCATGCGGCTGGATCTCGGATGA
PROTEIN sequence
Length: 447
MPSGLLAPPAADLAAIDPRIWPISASRVDGVLHLAGMDVRDLAAEYGTPALFLDETDFRTRCRGYAGAFEGADVFYAGKAFLSKAVARWVAEEGLGLDVCTGGELAVALAAGFPPARLALHGNNKSVTELRRALEVGVGYVVLDSFTEIARLADLAAETGVRPRVMVRVTVGVEAHTHEFIATAHEDQKFGFSLSSGAAAEAVRRVLKHSSLELAGLHSHIGSQIFDTSGFEVSAHRLVGLLTEIRNEHGIELPELDLGGGLGIAYTPDDDPAEVSVVAAELRQIVQRECRGAGLTVPRLSVEPGRALVGQAGVTLYEVGTVKDVDGLRTYVSIDGGMSDNIRAALYDAAYTCVLASRASDAPPMLARVVGRHCESGDVVVKDVWLPADVVPGDLLAVAGTGAYCRSMASNYNHTPRPPVVGVLDGASRVLVRRETEDDLMRLDLG*