ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1737_13

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(8239..9162)

Top 3 Functional Annotations

Value Algorithm Source
Probable secretion system protein TadC Tax=Janibacter sp. HTCC2649 RepID=A3TQW8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 309.0
  • Bit_score: 286
  • Evalue 2.10e-74
Probable secretion system protein TadC {ECO:0000313|EMBL:EAP97564.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 309.0
  • Bit_score: 286
  • Evalue 2.90e-74
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 307.0
  • Bit_score: 273
  • Evalue 4.00e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Janibacter sp. HTCC2649 → Janibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGATGGGTGCGGGACTGCTCCTAGTCGGATTGGGGGCCTCGGCGGCCGCCGTGCTGGTGGGCCTGCCGGCGGTGCTCGCGTCGAGCACCGGCCGTGCCGGCGTGGCGAAGACCCTCGCCACGATCGATCAGGTCTACCGACCGGGCCGCGCGCCCGAGGTGGACGAATCGTTCAGCGACCGGATCCTCGCTCCGCTCAGCCGCCGCGCCGGCTCGCTCGGCCGGGCGCTCACCCCGGCCGGTGTCGCTGCCCGAATGCAGCGCTCACTGGACCACGCCGGCAACCCGCCGGCCTGGCCGGTGGAGCGGATCCTCCAGGCGAAGGGCATCGGCCTCGTGGCGCTGGGGCTGTTCGGGCTGCTCTTCGGCGGCGTGGTTCTCGGCGGGACGTCGGGGCTGCTGCTCGGGGGCCTGGTCGGCGCCGCGCTCGGCGCGTTCCTGCCGGACCTGCTCCTACACAACCTCGGCGGCCGCCGCCAGCGGGAGATCCGGCGTACCCTCGCCGACATCCTTGACATGCTCACGGTCAGCGTCGAGGCCGGGCTCGGGTTCGACGCCGCGCTCGGGCAGGTCGCGCGCAACGGCAAGGGTCCGATGGTCGGCGAGATCGCTCGCGTCCTGCAGGAGATCCGGATCGGCAACCCGCGCGCCGAGGCGCTCCGCGCGATGGCCGCCCGCACCACCGCCCCGGAGCTGCGCAGCTTCGCGATGGCCGTGGTGCAGGCGACCGAGCTGGGTATCCCGATCGGGGCCGTGCTGCGCGTGCAGTCCAAGGAGATGCGGCTGCGGCGGCGGCAGAACGCGGAGGGGGCGGCCCAGAAGGTGCCCGTCAAGATCCTCTTCCCAATGCTGTTCCTGATCTTCCCTGCGTTGTTCGTGGTGATCATCGGCCCAGGCGCGCTGAAGGTCACCCAGCTCTTCTAG
PROTEIN sequence
Length: 308
MMGAGLLLVGLGASAAAVLVGLPAVLASSTGRAGVAKTLATIDQVYRPGRAPEVDESFSDRILAPLSRRAGSLGRALTPAGVAARMQRSLDHAGNPPAWPVERILQAKGIGLVALGLFGLLFGGVVLGGTSGLLLGGLVGAALGAFLPDLLLHNLGGRRQREIRRTLADILDMLTVSVEAGLGFDAALGQVARNGKGPMVGEIARVLQEIRIGNPRAEALRAMAARTTAPELRSFAMAVVQATELGIPIGAVLRVQSKEMRLRRRQNAEGAAQKVPVKILFPMLFLIFPALFVVIIGPGALKVTQLF*