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PLM1_60_b1_redo_sep16_scaffold_1737

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1737_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(208..780)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI0003474E0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40588.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_60_b1_redo_sep16_scaffold_1737_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(891..1616)
DNA (726bp) protein (242aa)
Short-chain dehydrogenase/reductase SDR Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8G7_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH80178.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Gluconate 5-dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_1737_3
unknown

Not on your lists

1744..1911
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1737_4
Streptomyces nobilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2017..2499)
DNA (483bp) protein (161aa)
Transcriptional regulator Tax=Streptomyces nobilis RepID=I2CME7_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:AFJ68080.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nobilis.;"
marR; MarR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1737_5
unknown

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2589..3056
DNA (468bp) protein (156aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1737_6
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3053..3520
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Streptomyces auratus AGR0001 RepID=J1RL65_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJJ05164.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
uncharacterized protein
PLM1_60_b1_redo_sep16_scaffold_1737_7
unknown

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comp(4204..4644)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1737_8
unknown

Not on your lists

comp(4641..4736)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1737_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4733..4924)
DNA (192bp) protein (64aa)
Transcriptional activator ligand binding domain protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6H3_NAKMY
transcriptional activator ligand binding domain-containing protein
Transcriptional activator ligand binding domain protein {ECO:0000313|EMBL:ACV78828.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_1737_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4992..6200)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262898B
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AIJ21351.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_1737_11
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6659..7615)
DNA (957bp) protein (319aa)
Carbonyl reductase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HXJ4_9PSEU
Carbonyl reductase {ECO:0000313|EMBL:KDN21164.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1737_12
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7773..8129
DNA (357bp) protein (119aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00036494B2
Uncharacterized protein {ECO:0000313|EMBL:EWM63417.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1737_13
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8239..9162)
DNA (924bp) protein (308aa)
Probable secretion system protein TadC Tax=Janibacter sp. HTCC2649 RepID=A3TQW8_9MICO
Probable secretion system protein TadC {ECO:0000313|EMBL:EAP97564.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
type II secretion system protein
PLM1_60_b1_redo_sep16_scaffold_1737_14
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9162..11114)
DNA (1953bp) protein (651aa)
Type II secretion system protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT5_THECD
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ACY97424.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1737_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11108..12511)
DNA (1404bp) protein (468aa)
Type II secretion system protein E Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT6_THECD
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACY97425.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1737_16
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12508..13704)
DNA (1197bp) protein (399aa)
AAA ATPase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VS29_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK44651.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
AAA ATPase
PLM1_60_b1_redo_sep16_scaffold_1737_17
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13718..14506)
DNA (789bp) protein (263aa)
Flp pilus assembly protein CpaB Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVB9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK44652.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
Flp pilus assembly protein CpaB
PLM1_60_b1_redo_sep16_scaffold_1737_18
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14543..15661)
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Actinoplanes liguriensis RepID=D8V3M7_ACTLG
Uncharacterized protein {ECO:0000313|EMBL:KJK44653.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1737_19
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15649..16146)
DNA (498bp) protein (166aa)
TadE family protein Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UXV2_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KJK44654.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
TadE family protein
PLM1_60_b1_redo_sep16_scaffold_1737_20
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16215..16400)
DNA (186bp) protein (62aa)
Flp/Fap pilin component Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HCJ2_ARTCA
Flp/Fap pilin component
Flp/Fap pilin component {ECO:0000313|EMBL:ACL40608.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
PLM1_60_b1_redo_sep16_scaffold_1737_21
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16717..17418
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N7I8_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ27169.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_60_b1_redo_sep16_scaffold_1737_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18269..19897)
DNA (1629bp) protein (543aa)
protein kinase Tax=Salinispora pacifica RepID=UPI00035C569A
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACY99498.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1737_23
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20144..20488)
DNA (345bp) protein (115aa)
glyoxalase Tax=Streptomyces canus RepID=UPI00036306AE
Putative uncharacterized protein {ECO:0000313|EMBL:EDY59778.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1737_24
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20620..21495
DNA (876bp) protein (292aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00038028AA
RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CAM01245.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_60_b1_redo_sep16_scaffold_1737_25
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21563..22111)
DNA (549bp) protein (183aa)
ATP-binding protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXD3_9ACTO
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AGZ41618.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 25 items

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