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PLM1_60_b1_redo_sep16_scaffold_1737_24

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 20620..21495

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00038028AA similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 290.0
  • Bit_score: 398
  • Evalue 3.60e-108
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 305.0
  • Bit_score: 368
  • Evalue 1.10e-99
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CAM01245.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 305.0
  • Bit_score: 368
  • Evalue 5.50e-99

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Taxonomy

Saccharopolyspora erythraea → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GTGGACGCACAAGATTATCTGGCGGGGCGGTTCGAGGAGGATCGGCCGCACCTGACGGCCGTGGCCTACCGCATGCTCGGATCGTCGGCCGAGGCGGACGACGCCGTCCAGGAGGCCTGGCTCCGTCTGAGCCGGTCCGAGGTGAGCGGCATCGACAACATCACGGGTTGGCTGACGACAGTCGTCGCCCGGGTGAGCCTCGACATGTTGCGATCGCGGAAGTCACGCCGCGAAGACCCGCTCGAGACGCATCTGCCGGAGCCGACCACGACGGACCACGACGGGGTCGACCCCGAGCGCGAGGCCGTGATGGCCGATTCGGTCGGGCTCGCGCTGCTCGTCGTGCTCGACACCCTCGCTCCTGCGGAGCGGCTCGCGTTTGTACTGCACGACATGTTTGCTGTGCCGTTCGAGGAGATCGCCGGCATCGCGGGGCGCACGCCGAGCGCGGCTCGGCAGCTTGCGAGCCGGGCACGCCGGCGCGTGCAGAGTGCGTCCTCGATGCCGGATGCCGATTTCGCCCGCCAGCGGGCAGTCGTTGACGCGTTCCTGGCCGCGTCACGCGGCGGCGATTTCGACGCGCTGCTTGCGCTGCTCGACCCTGACGTTGTGCTCCGTGCGGATCAGGCGACCGTCGCCGCGGGCGCGTCGAGCGAGGTTCGCGGCGCGCAGGCCGTCGCCGGCACGTTCTCCGGTCGCGCGCAGGCGGCACAGCTCGCCCTCATCGACGGCGTCGTCGGAGCCGTGTGGGCACCCAGCGGACGGCCGCGGGTCGTGTTCGGTTTCAGGGTCGAGGGCGGGAAGATCGTCGGAATCGAGATGGTCGCCGATCCCGACCGCGTCGGCGAGCTCGATCTCGCGGTGCTGAGCGACTAA
PROTEIN sequence
Length: 292
VDAQDYLAGRFEEDRPHLTAVAYRMLGSSAEADDAVQEAWLRLSRSEVSGIDNITGWLTTVVARVSLDMLRSRKSRREDPLETHLPEPTTTDHDGVDPEREAVMADSVGLALLVVLDTLAPAERLAFVLHDMFAVPFEEIAGIAGRTPSAARQLASRARRRVQSASSMPDADFARQRAVVDAFLAASRGGDFDALLALLDPDVVLRADQATVAAGASSEVRGAQAVAGTFSGRAQAAQLALIDGVVGAVWAPSGRPRVVFGFRVEGGKIVGIEMVADPDRVGELDLAVLSD*