ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1737_15

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(11108..12511)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT6_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 459.0
  • Bit_score: 632
  • Evalue 3.10e-178
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 459.0
  • Bit_score: 632
  • Evalue 8.70e-179
Type II secretion system protein E {ECO:0000313|EMBL:ACY97425.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 459.0
  • Bit_score: 632
  • Evalue 4.30e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGAGCCTCTCCGCACGCCTCGCCCAGCGCGAGCTGACCGCGCCCCAACCGGTGCAGACCGACTCGGCGCCTCGCCCTGTCCATGCACCGGCCCGGACATCCAGCGAACCGGCTGCACGCCCCCGTGACGTGGTGGCACCGGTCCGCCGCCGGGTACACCAGCGGCTCCTCGAACTGCTCGGCCCGCAGATGTACGAGCAGGTCGGCGAGCAGGCCGATCTGGAGGAGCGGGTCCGCGACACGATCCAGGAGGTGCTGCTCAGCGAGGACACACCACTGACCGCCGCGGACCGGGCCAGGGTGTCGCTGGAAGTCGCCGACGAGATCCTCGGCCATGGGCCGCTTGAGCCGTTCCTGCGGGACCCGGCGATCAGCGAGATCATGGTCAACGGCCCGGACAAGATCTTCGTCGAGCGCGACGGCCGGCTCCACCACGTCGACGCCGAGTTCTTCGACGACGCGCACCTGCGCCGGGTGATCGACCGCATCGTCACCCGTGTGGGCCGGCACATCGACGAGTCGAGCCCGATGGTCGACGCGCGCCTGCCCGACGGCAGCCGGGTCAACGCCGTGGTGCCGCCGATCGCCCTCGACGGCTCGTCGCTGACGATCCGGAAGTTCTCCGCGGACCCGTACACCGTTGCGGACCTGATCGGGTTCGGCACAATGACGCCGGCCACCGCGACGCTCCTCGACGCGTGCGTCCGTGGCCGGCTGAACATCCTGGTCAGCGGCGGTACGGGCTCGGGCAAGACGACCACGCTCAACGTGCTCTCCAGCTTCATCCCGGACGACGAGCGGATCGTCACGATCGAGGACGCGGCCGAGATCCAGCTCCGGCAGGAGCACGTGGTGCGGCTGGAGTCACGCCCGGCGAACATCGAGGGGCGCGGCGACGTCAGCATCCGCGACCTGGTCCGCAACTCGCTGCGGATGCGGCCCGACCGGATCGTCGTCGGCGAGGTCCGCGACGGTGCCGCGCTGGACATGTTGCAGGCGATGAACACCGGCCACGACGGATCGCTCACCACGATCCACGCGAACACGCCGCGCGACACCATGGCCCGGCTGGAGACCATGGTGCTGATGGCCGGCATGGACCTGCCGATCCGCGCCATCCGCGAGCAGGCCGCCGCCGCCGTGGACCTGATCATCCAGGTCTCGCGGCTCAAGGACGGTAGCCGGCGGATCACCCACATCACCGAGGTCGTCGGCATGGAGGGTGAGATCATCACGCTGCAGGACGTCTTCGTCTTCAACTACAAGGCCGGGGTCGACGAGAACGGCCGGTACCTCGGCACCCTCATCCCGACCGGCCTGCGACCGCGCTTCCTGGACCGGTTCGAGGCGAACGGCATCACCGTGCCCGCCGAGATCTTCGGGCAGCCGGAGCAACGGTGGTGA
PROTEIN sequence
Length: 468
MSLSARLAQRELTAPQPVQTDSAPRPVHAPARTSSEPAARPRDVVAPVRRRVHQRLLELLGPQMYEQVGEQADLEERVRDTIQEVLLSEDTPLTAADRARVSLEVADEILGHGPLEPFLRDPAISEIMVNGPDKIFVERDGRLHHVDAEFFDDAHLRRVIDRIVTRVGRHIDESSPMVDARLPDGSRVNAVVPPIALDGSSLTIRKFSADPYTVADLIGFGTMTPATATLLDACVRGRLNILVSGGTGSGKTTTLNVLSSFIPDDERIVTIEDAAEIQLRQEHVVRLESRPANIEGRGDVSIRDLVRNSLRMRPDRIVVGEVRDGAALDMLQAMNTGHDGSLTTIHANTPRDTMARLETMVLMAGMDLPIRAIREQAAAAVDLIIQVSRLKDGSRRITHITEVVGMEGEIITLQDVFVFNYKAGVDENGRYLGTLIPTGLRPRFLDRFEANGITVPAEIFGQPEQRW*