ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1737_17

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(13718..14506)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVB9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 269.0
  • Bit_score: 172
  • Evalue 2.90e-40
Uncharacterized protein {ECO:0000313|EMBL:KJK44652.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 260.0
  • Bit_score: 181
  • Evalue 1.10e-42
Flp pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 269.0
  • Bit_score: 172
  • Evalue 8.10e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGAACCGTCGCTTCCTCGCCCTGGTCCTCGCCGTCGCCTGCGCCGGGGTTGCCGTCTTCGCGGTGCTGGCGTACGTCAGCGCCGCGGACGAGCGCGCGCTCGCGGGCAAGCAGGCCGTCACGGTGCTGGTCGCGGCCGAGCGCTTTCCGGCGGGGACCGCGGTGGCAACGCTGCGCGCGAAGGGCAAGCTCAACGCGGTACGGATGCCAGCAGAGACGGTCCCCGACGACGCGATCGAGGTACTCGGCCCAGACCTGACCGGCCTGGTCCTCACCGCCGACATCCAACCCAGCCAGCTCGTGCTGCGGGGCATGTTCGGTCGCAACCCCGACGTCACGGGCGGATTGGTCGTGCCCGAGGGCAAGATCGCGGTCAGCGTCGAGCTGACCGCCGCGGAACAGGTCGCCGGGTACGTCCGGCCCGGCGTGAAGATCGCCGTCTTCGACACCTTCACGGTGATGGAGGGCAAGGGGCGGATCCCGTCCGGCGACGGCATCGCGAGCAAGCACGAGGCGAACCACGCCACCCGGCTGCTGCTACCCCGCGTCGAGGTGATCGCGGTCGGCTCGGGTACCGAGGGCACCACCTCCACCTCCACCGGCGGTGGCGGCGCGAAGACGCCCGCTGTCGTTGGCACCGGAATGCTGGTCACGGTTGCCGTCACCCAGCAGGAGGCCGAACGGCTGGTGCACGCCAGCAAGACCGGCTCGCTCTCTCTCGCCCTGCTCACCGACTCCGCGCCGGTCCGCCCTGGACCGGGCGTCGACAACTACACCCTCATCCCCTGA
PROTEIN sequence
Length: 263
MNRRFLALVLAVACAGVAVFAVLAYVSAADERALAGKQAVTVLVAAERFPAGTAVATLRAKGKLNAVRMPAETVPDDAIEVLGPDLTGLVLTADIQPSQLVLRGMFGRNPDVTGGLVVPEGKIAVSVELTAAEQVAGYVRPGVKIAVFDTFTVMEGKGRIPSGDGIASKHEANHATRLLLPRVEVIAVGSGTEGTTSTSTGGGGAKTPAVVGTGMLVTVAVTQQEAERLVHASKTGSLSLALLTDSAPVRPGPGVDNYTLIP*