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PLM1_60_b1_redo_sep16_scaffold_2115_11

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 8329..11223

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQC5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 969.0
  • Bit_score: 635
  • Evalue 7.50e-179
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 969.0
  • Bit_score: 635
  • Evalue 2.10e-179
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA28398.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 969.0
  • Bit_score: 635
  • Evalue 1.10e-178

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2895
GTGGACGGCGTGCTGTGTCCGATCGTCGTCGGACGCGCCACCGAGCTGGTGGCCCTGGCCGGGTTGCTGGACGCCGCGGCCGCGGGGCACGGCCGGCTCGCCGCGTTGCTCGGCGACGCCGGCATCGGCAAGTCGAGGCTGGTCCGGGAGTTGGCCGCGGCGGCCGGCACGCGGCAGATGGTCGTGCTGACCGGCCGTGCCGTACCCGGCCCGTCGCCGGTGCCGTTCCGGCCGCTCACCGAGGCGCTGCTGATCGCGGGGCGCAGCGGTGGCCCGCCGAAGGCTCACGAACTGGCCGGGTTCGGTGGCCAGCTGGCGCGGCTCGTGCCGGACTGGGCATCCCCGGCGTCGGGCGGCGCGGACGAGTCGCCGGTGCTGATCGGCGAGGCCGTCGTGCGCCTGCTGCGGGTGCTCGGCCGAAGCGGCTCCCGTACCGGCTGCCTGCTGGTGCTCGAAGACCTGCACTGGGCCGACCCGGAGACTCTCGCGGTCGTGGAGTACCTGGCGGACACCCTGGCAGCCGAACCGGTGGCCTGCCTGCTCACCAGCAGGCCAGAGCCAACGGCGGCGGCGACACCCTTGATCGAGCGGCTTCGGACCCGCGGGGCGTGTTCGGTCGTTCGGCTCGACCCGCTGACCGCCGACGAGCAGCGGCGGATGGTGACTGCGTGCCTTGCCGACGACGCCGCGGCCGCGGAGGTTGCGGCGTTCGTGGCCGCACACAGCGACGGAGTGCCGTTTCTCGTGGAGGAGCTGCTGGCCGGGCTGGCGGCGACCGGGGCCCTGCGCCGCACCGACGGACGGTGGACGGTCGAGCGACCCCTGGCACCGGCGGTTCCGGCGAGCCTCGCCGAATCGGTGCGCAGCCGGCTCGCGGTGCTCGACGTGACCAGCCGGCAAGTGCTCGGCGCGGCGGCGGTGCTTGGCCGCCGGTTCGACTGGGACCTGCTGCCCGGCGTCGCCGCGGTGGACGGCGGCACCGCGATGGAGGCGCTGCGGGCGGCGATCCGCGACCAGCTGGTCGTGATCGAGGGTTCGACGTTCCGCTTCCGGCACGCGCTCACTCGGGAGGCGGTGCTCGCCGAACTGTTGCCGCCGGAACGCGCCGCGATGTCGGCCCGGGCTCTTGTCGCGGTCCGTCGGGCGCACCCTGGGTTGCCCGGCCCGTGGTGTGAGCTGGCCGCCGAGCTTGCCGAGGCCGCTGGCGAGCGGGCGGAGGCGGCCGCGCTGTTCGTCGAGAGCGCCCGTCGCGCTCTGGCCCGCGGCGCGTTGATCAGCGCCGAGGCGACCGCGCAGCGGGCTCGCGAGTTCGCCGCCGACGCCGATGCCGACGTTGCCAGCGCCGCCGACGAGGTGCTGGTCAGGGCGCTCGCTGCGGCCGGTAAGCCGGGGCCGGCCCGCGAGATCGGCGTTGCGCTGCTGGACCGGCTCGCCGAGGCGCCGATTGGCCGGCGGGCCGACCTGTCGCTCGAGTTGGCCCGCGCCGCGATCGCGGTCGGCGACTACCGTGCGGCGGCCGCCGACGTCGACCGAGCCCAGCGGGCGCTGGGCGAAGCGCCCGACGTGCGCATCGCGGCGCGGGTGGACGCGGTCGCGGCGCACGTGGCGCTGGAGCAGGAACGACTGGACGACGCCGAACGGCTCGCCGAGGCGGCGGCCGCCGCCGCTCGCGATGCCGAGTCGCCCGAGGTCGAGTGCGAGGCGCTCGAGGTGCTCGGCCGGGTGACCCGGATGCAGGACCTTGCTGGCGGGCACAACTACTTCGCGCAGGCGGCCCGGCTCGCCGAGCGGCACGGGCTCACGCTGTGGCTGTTGCGGGCCCGGCAGGAACTGGCGTTGCAGTCGGCGTGGCTTGGCACCCCGCAGCCGCTGCGGGAGCTGCGTGCACTCGCCGCTGAGGCGGGCGCGCTAGTGACGGTGGCGCAGATGGAACTGCTGCTCGCCGACATCGCTTTGTCCCGCCTGGAGCAGGACGAATGCCGGTCCGCCGCCCAGAGCTGCGTCGAGTTGAGCCGGCGGCTCGGCCTGGCCAGCCTGCCGGTCGCGCTGCTGTGGCTTGCCGGTGCACATGCGCTGGCCAACGACCAGGGCGAGATGGAGGCGGTGCTCGCCGAGGCGAGCCGGGTGGCGCCGGAGGACCCGCGGATCCTCGCCGACGCCTGGGGCCGCGTCCGCGCCCTGCGGTGCGCCATGCAGGAGGACCGGGCCGGAGCCCGCCGCGCGCTCGACGAGTCGATGCCCTACGTGCGGGCGGCACCGGCCAGCCGGTCGATCTTCCCCGGCCGATTGCTGTGGGCGTTGTTGCACACCCTGGACGACGACGATTTCGGCGCGCGGGCACGCGCTGAGGTGCGGTCCTCGCAGCTGGCCCGGACGCCGCTGCGGACAGTGCTCGATCTGCTGGATGCCGTCGCCCTTGGCCGGCACGGCCGCCGGGCCGAGGCGACGGCGCTGGCCAGCGGTGCGATCGGCGAACTCGACCTCGTCGGCGGCCGGATCATGTTGCTGTTGCGGCTGGTCGCCGAGGCGGCGGTCCGCGATGGCTGGGGGGAGCCGGTGGCCTGGCTGCGCAGGGTGGAGGGGTTCTTCGCCGAACGGGGCTACGACAAGGTGGCGCGGGCCTCGCGTGCGTTGCTCAAGGAGGCCGGTGCGCCGGCGCCCCGCCGTGGCCGAGGTGATTCGGCGGTGCCGGCGGAGCTACGCGCGGTCGGCGTCACCAGCCGGGAGATGGACGTGCTCAAGCTGATCGCGGAGGGGTTGCCGAACCGCGAGATCGCCGAGCGGCTGTACCTGTCGCCGCGTACGGTCGAGCACCACGTCGCCAGCCTGCTGCGTCGCACTGGCGCTCCGACCCGCGCCGCCCTGGCGGCCGTGGCCTCGCGGTTGTCGACGTGA
PROTEIN sequence
Length: 965
VDGVLCPIVVGRATELVALAGLLDAAAAGHGRLAALLGDAGIGKSRLVRELAAAAGTRQMVVLTGRAVPGPSPVPFRPLTEALLIAGRSGGPPKAHELAGFGGQLARLVPDWASPASGGADESPVLIGEAVVRLLRVLGRSGSRTGCLLVLEDLHWADPETLAVVEYLADTLAAEPVACLLTSRPEPTAAATPLIERLRTRGACSVVRLDPLTADEQRRMVTACLADDAAAAEVAAFVAAHSDGVPFLVEELLAGLAATGALRRTDGRWTVERPLAPAVPASLAESVRSRLAVLDVTSRQVLGAAAVLGRRFDWDLLPGVAAVDGGTAMEALRAAIRDQLVVIEGSTFRFRHALTREAVLAELLPPERAAMSARALVAVRRAHPGLPGPWCELAAELAEAAGERAEAAALFVESARRALARGALISAEATAQRAREFAADADADVASAADEVLVRALAAAGKPGPAREIGVALLDRLAEAPIGRRADLSLELARAAIAVGDYRAAAADVDRAQRALGEAPDVRIAARVDAVAAHVALEQERLDDAERLAEAAAAAARDAESPEVECEALEVLGRVTRMQDLAGGHNYFAQAARLAERHGLTLWLLRARQELALQSAWLGTPQPLRELRALAAEAGALVTVAQMELLLADIALSRLEQDECRSAAQSCVELSRRLGLASLPVALLWLAGAHALANDQGEMEAVLAEASRVAPEDPRILADAWGRVRALRCAMQEDRAGARRALDESMPYVRAAPASRSIFPGRLLWALLHTLDDDDFGARARAEVRSSQLARTPLRTVLDLLDAVALGRHGRRAEATALASGAIGELDLVGGRIMLLLRLVAEAAVRDGWGEPVAWLRRVEGFFAERGYDKVARASRALLKEAGAPAPRRGRGDSAVPAELRAVGVTSREMDVLKLIAEGLPNREIAERLYLSPRTVEHHVASLLRRTGAPTRAALAAVASRLST*