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PLM1_60_b1_redo_sep16_scaffold_2115

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2115_1
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..333)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BSL9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2115_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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512..1267
DNA (756bp) protein (252aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00037BC3A6
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAH47093.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM1_60_b1_redo_sep16_scaffold_2115_3
unknown

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comp(1727..2104)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2115_4
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2214..3062)
DNA (849bp) protein (283aa)
integrase Tax=Frankia sp. Iso899 RepID=UPI0003B5D7C9
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EWM64139.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
phage integrase family protein
PLM1_60_b1_redo_sep16_scaffold_2115_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3178..4026)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000376548B
alpha/beta hydrolase family protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AHH19515.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM1_60_b1_redo_sep16_scaffold_2115_6
unknown

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comp(4153..4521)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2115_7
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4792..5613)
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=I7DVR0_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK45597.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_2115_8
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5773..6468)
DNA (696bp) protein (232aa)
Putative IS630 family transposase Tax=Frankia sp. (strain CcI3) RepID=Q2JBA8_FRASC
IS630 family transposase
Putative IS630 family transposase {ECO:0000313|EMBL:ABD11434.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_2115_9
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6475..6975)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI0003830250
Transposase {ECO:0000313|EMBL:KIZ15422.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
putative transposase
PLM1_60_b1_redo_sep16_scaffold_2115_10
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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7029..7364
DNA (336bp) protein (112aa)
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JBA9_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD11433.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_2115_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8329..11223
DNA (2895bp) protein (965aa)
Transcriptional regulator, LuxR family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQC5_PSEUX
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA28398.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_2115_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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11443..12180
DNA (738bp) protein (246aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000377C206
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB74250.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_2115_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12195..12956
DNA (762bp) protein (254aa)
hypothetical protein Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI0003620E35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79549.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_2115_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13021..13278
DNA (258bp) protein (86aa)
GCN5-related N-acetyltransferase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY48_HERA2
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIE87972.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM1_60_b1_redo_sep16_scaffold_2115_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13347..13865
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY48_HERA2
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIE87972.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM1_60_b1_redo_sep16_scaffold_2115_16
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14047..14307
DNA (261bp) protein (87aa)
Patatin {ECO:0000313|EMBL:EWT02187.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Displaying 16 items

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