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PLM1_60_b1_redo_sep16_scaffold_2627_14

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 9936..10139

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein Tax=Frankia sp. Iso899 RepID=UPI0003B426C6 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 67.0
  • Bit_score: 127
  • Evalue 2.70e-27
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 4.20e-26
Putative cold shock protein {ECO:0000313|EMBL:EIK73391.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 1.20e-25

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Taxonomy

Pseudomonas synxantha → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGACTCAAGGCACCGTGAAGTGGTTCAACGCCGAGAAGGGCTTCGGCTTTATCGCCCCGGACGACGGCACCGCCGACGTGTTCGTCCACTACTCGGCCATCGCTACCGAGGGCTACCGGTCGCTGGATGAGAACCAGCGCGTCGAGTTCGACGTGACGCAGGGCCAGAAGGGCCCGCAGGCCGAGCAGGTCCGCGCCGTCTGA
PROTEIN sequence
Length: 68
MTQGTVKWFNAEKGFGFIAPDDGTADVFVHYSAIATEGYRSLDENQRVEFDVTQGQKGPQAEQVRAV*