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PLM1_60_b1_redo_sep16_scaffold_2627

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2627_1
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..115
DNA (114bp) protein (38aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
fumarate reductase Tax=Kribbella catacumbae RepID=UPI000361A632
frdBC; putative fumarate reductase
PLM1_60_b1_redo_sep16_scaffold_2627_2

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112..519
DNA (408bp) protein (136aa)
Fumarate reductase subunit C Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 PF0_9NOCA">RepID=I0WPF0_9NOCA
Fumarate reductase subunit C {ECO:0000256|SAAS:SAAS00095967}; species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
frdC; fumarate reductase membrane anchor subunit
PLM1_60_b1_redo_sep16_scaffold_2627_3

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519..887
DNA (369bp) protein (123aa)
frdD; Fumarate reductase subunit D (EC:1.3.99.1)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003810A01
Fumarate reductase subunit D {ECO:0000313|EMBL:AKA59472.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
PLM1_60_b1_redo_sep16_scaffold_2627_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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895..1911
DNA (1017bp) protein (339aa)
Zinc-binding alcohol dehydrogenase family protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN99_PSEUX
zinc-binding alcohol dehydrogenase protein
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AEA27123.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_2627_5
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1908..3209
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003649069
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM1_60_b1_redo_sep16_scaffold_2627_6
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3225..3617
DNA (393bp) protein (131aa)
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JAC9_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA03400.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
PLM1_60_b1_redo_sep16_scaffold_2627_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3623..4645)
DNA (1023bp) protein (341aa)
NADPH:quinone reductase (EC:1.6.5.5)
Alcohol dehydrogenase zinc-binding domain protein Tax=Frankia sp. EUN1f RepID=D3D2K2_9ACTO
NADPH:quinone reductase {ECO:0000313|EMBL:ETK37521.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM1_60_b1_redo_sep16_scaffold_2627_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4696..5100)
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5Q1_STRRD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACZ91355.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_2627_9
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(5136..5618)
DNA (483bp) protein (161aa)
ATPase Tax=Salinispora pacifica RepID=UPI0003705249
hypothetical protein
Gll1436 protein {ECO:0000313|EMBL:BAC89377.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM1_60_b1_redo_sep16_scaffold_2627_10
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5615..5959)
DNA (345bp) protein (115aa)
Transcriptional regulator, ArsR family Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PY28_STANL
Toxin-antitoxin system, antitoxin component, ArsR family {ECO:0000313|EMBL:EWM65258.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
regulatory protein ArsR
PLM1_60_b1_redo_sep16_scaffold_2627_11
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6078..7241
DNA (1164bp) protein (388aa)
Saccharopine dehydrogenase (NAD(+),L-glutamate-forming) (EC:1.5.1.9)
Saccharopine dehydrogenase (NAD(+),L-glutamate-forming) {ECO:0000313|EMBL:CCH29977.1}; EC=1.5.1.9 {ECO:0000313|EMBL:CCH29977.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Saccharopine dehydrogenase (NAD(+),L-glutamate-forming) Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JX78_SACES
PLM1_60_b1_redo_sep16_scaffold_2627_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7345..8811
DNA (1467bp) protein (489aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ADB53079.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ADB53079.1};; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Gamma-glutamyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9Y4_CONWI
PLM1_60_b1_redo_sep16_scaffold_2627_13
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(8842..9675)
DNA (834bp) protein (278aa)
Putative secreted hydrolase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUH9_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KGH44485.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
putative secreted hydrolase
PLM1_60_b1_redo_sep16_scaffold_2627_14
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9936..10139
DNA (204bp) protein (68aa)
cold-shock protein Tax=Frankia sp. Iso899 RepID=UPI0003B426C6
cold-shock DNA-binding protein family protein
Putative cold shock protein {ECO:0000313|EMBL:EIK73391.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
PLM1_60_b1_redo_sep16_scaffold_2627_15
unknown

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10277..10453
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2627_16
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10496..11632)
DNA (1137bp) protein (379aa)
alanine dehydrogenase Tax=Amycolatopsis nigrescens RepID=UPI00036A993D
Alanine dehydrogenase {ECO:0000313|EMBL:KJK51004.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
alanine dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_2627_17
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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11843..12727
DNA (885bp) protein (295aa)
delta fatty acid desaturase Tax=Nocardiopsis synnemataformans RepID=UPI0003455011
Delta fatty acid desaturase {ECO:0000313|EMBL:KIH97704.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
fatty acid desaturase
Displaying 17 items

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