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PLM1_60_b1_redo_sep16_scaffold_2552_5

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3447..4643)

Top 3 Functional Annotations

Value Algorithm Source
Putative cell envelope-related transcriptional attenuator Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HCC7_ACTM4 similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 371.0
  • Bit_score: 208
  • Evalue 1.20e-50
Transcriptional attenuator, LytR family {ECO:0000313|EMBL:EXG79038.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 377.0
  • Bit_score: 215
  • Evalue 1.10e-52
putative cell envelope-related transcriptional attenuator similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 371.0
  • Bit_score: 208
  • Evalue 3.50e-51

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGGGAGAGACGCGTCGCTAGCCGAGCTGCGCTCGCCGAGGCCCGGTACTCGCGATGAGCTCGCGACCCCGGTTCCACCAGCCAAGAAGGGCCGTCGGGCGCCCCTGTGGGCGAAGGCGTTCATCGCTATGGGCGCGGTCCTGGTCGTCGGCTCGACCGGCACGGTCGCCGCTGGCAAGCTCATTGCCAAGCGTTACGAGGGCAGCGTCCAGCGTGACGATTTGCTCGGCGCAGCAGCGCCAGCCGCGAAGGAGCCGGCCAAGGTCAACGGGCCACTGACGTTCCTCGTCATGGGCTCCGACAGCCGCGCGGGTGACAACTTCAACCCCGAGACCCCCGATGGCAGCTCCGCTGCGGTCGGCGGCGCCCCGCGCAGCGACACGATCATCATGATGCACGTCCCGAAGACGATGGACCGCGCATACGTGGTCTCGATCCCGCGCGACACCTACATCTCGATCGCGGACAAGAACGGCGACCCGGCAGGCAAGAACAAGATCAATGCCGCGTTCGCCTTCGGCGGCGCCCCCCGCCTGGTGCAGACCCTCAACAACTTCACGGGCAGCAAGATCGACTACCCGGTGATCGTCGACTTCTCCGCGGTCCGCAAGATCACCGACCTGGTCGGCGGTGTGGACGTGGTCGTCGACACCCAGAGCTACGACGAGTACCGCTTCATGCCGAAGAACACGACGTACCCGACCACCCCGTGCATCGACACGCACGGTCGCAAGCAGCGGTGCCTCACGTTCAAGAAAGGCCCGCTGCACCTCGACGGTCAGCTCGCCGAGTACTACGTGCGGCAGCGCACCGGCCTCCAGAACGGCGACCTCGACCGCGCCAAGCGCCAGCAGCAGTTCCTCCGCGCGCTGATGTCGAAGGCCGCCTCGGGCGACATGCTCACCGACCCGGTGAAGTTCGACAAGTTCGTTCGTACGGTCGGCGGCGCCATCACGGTCGACAAGCGGATGCCGGTCAACGGGCTGGCGTTCTCGCTCAAGAAGCTCCGCCCGGCGGACCTGGTGTTCATGACACTCCCCACCGCAGGGTTCGCCGACGTTCCCGGCGTCGGCAACGTCGTGCGGCCGAACGTGGCGCAGTCGAAGGAACTGTTCGCCGCGATCGACAACGGCACGATGGACCAGTACCTGCTCAAGTACCCGACGGCGTCGAACGACGTCTCGCACGGGTCTTAA
PROTEIN sequence
Length: 399
MGRDASLAELRSPRPGTRDELATPVPPAKKGRRAPLWAKAFIAMGAVLVVGSTGTVAAGKLIAKRYEGSVQRDDLLGAAAPAAKEPAKVNGPLTFLVMGSDSRAGDNFNPETPDGSSAAVGGAPRSDTIIMMHVPKTMDRAYVVSIPRDTYISIADKNGDPAGKNKINAAFAFGGAPRLVQTLNNFTGSKIDYPVIVDFSAVRKITDLVGGVDVVVDTQSYDEYRFMPKNTTYPTTPCIDTHGRKQRCLTFKKGPLHLDGQLAEYYVRQRTGLQNGDLDRAKRQQQFLRALMSKAASGDMLTDPVKFDKFVRTVGGAITVDKRMPVNGLAFSLKKLRPADLVFMTLPTAGFADVPGVGNVVRPNVAQSKELFAAIDNGTMDQYLLKYPTASNDVSHGS*