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PLM1_60_b1_redo_sep16_scaffold_2552

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2552_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(181..642)
DNA (462bp) protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000366B0BA
putative cytidine/deoxycytidine deaminase
PLM1_60_b1_redo_sep16_scaffold_2552_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(639..1169)
DNA (531bp) protein (177aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RF26_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP72180.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2552_3
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1583..1837)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00035C9380
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM1_60_b1_redo_sep16_scaffold_2552_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1834..3405)
DNA (1572bp) protein (524aa)
Radical SAM domain protein Tax=Mycobacterium smegmatis MKD8 RepID=L8F6Z0_MYCSM
Radical SAM protein {ECO:0000313|EMBL:ETK34823.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
radical SAM protein
PLM1_60_b1_redo_sep16_scaffold_2552_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3447..4643)
DNA (1197bp) protein (399aa)
Putative cell envelope-related transcriptional attenuator Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HCC7_ACTM4
Transcriptional attenuator, LytR family {ECO:0000313|EMBL:EXG79038.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative cell envelope-related transcriptional attenuator
PLM1_60_b1_redo_sep16_scaffold_2552_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4822..5523
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRD6_9ACTO
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY98023.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_2552_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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5526..6623
DNA (1098bp) protein (366aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B211_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89235.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_2552_8
unknown

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comp(6620..6988)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2552_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6988..7359)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBY9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79139.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2552_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7377..8177)
DNA (801bp) protein (267aa)
Prolipoprotein diacylglyceryl transferase Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WLW4_MYCKA
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ETK34821.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
diacylglyceryl transferase
PLM1_60_b1_redo_sep16_scaffold_2552_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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8310..8858
DNA (549bp) protein (183aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACN5_THECD
Uncharacterized protein {ECO:0000313|EMBL:EXG79138.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2552_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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8952..10412
DNA (1461bp) protein (487aa)
Lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Lysine--tRNA ligase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B607_FRADG
PLM1_60_b1_redo_sep16_scaffold_2552_13
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10467..11642)
DNA (1176bp) protein (392aa)
Predicted L-rhamnose isomerase RhaI (EC:5.3.1.14)
rhamnose isomerase Tax=Nonomuraea coxensis RepID=UPI00037E2441
Sugar isomerase {ECO:0000313|EMBL:EFE65346.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
PLM1_60_b1_redo_sep16_scaffold_2552_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(11744..12445)
DNA (702bp) protein (234aa)
TetR family transcriptional regulator Tax=Actinomadura flavalba RepID=UPI00037C27F5
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGZ45677.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_2552_15
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(12454..12885)
DNA (432bp) protein (144aa)
Integral membrane protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H586_STRPR
Integral membrane protein {ECO:0000313|EMBL:EDY61997.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
membrane protein
Displaying 15 items

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