ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2568_9

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 4932..6857

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6G3_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 567.0
  • Bit_score: 358
  • Evalue 9.00e-96
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 567.0
  • Bit_score: 358
  • Evalue 2.50e-96
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACY96438.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 567.0
  • Bit_score: 358
  • Evalue 1.30e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
ATGCGCGCCACCCGCCATGAGCATGGGGCTCCCAGGCGCGAGGACGAGACGATCGGGCACGCGTCTGAGCAAGCCTCGGCGTCAGCCCACAGGTCCGTGCCCTTCGTTGGACGGCGCGCTGCGGTCGAGACGCTGGCGGACGCCGTTCGCGGCAGCAGCGACCAGGGCGAGTGTCCTGTCGTTCTCGTCTCGGGTGATCCCGGGATCGGCAAGACAACGCTGATCAGCCAGCTGCCGCGGATGGTTCCCGGCCCGCGGTATCTGGTCGGTAGATGCATGGACTTCGGAGAGGCTCCGTCCTACGCGCCGTTCGCTGGGATCCTGCGGGAGCTCGTCCGCGGCGACGGGCTCGCCGGACTGCGCCGAGAATTGGCCCCCTCAGTCGCTTCGGCGCTCGCCTGGTTGCTCCCTGACTTCGATGAGCCGCTGCCGCCCGACCCGGGAACACGGACGCGCATGTTCGACGCCTTCCTGAGTCTGCTGGAGCACCTTGCAAGGTCGTCCCCAGTTGTCCTCGTCGTTGAGGATGTTCACTGGGCCGACCAGTCCACTTGGGACCTGCTTATCTTCGTAATTGGAAACGCCGCGGACGTCCCGATGACCACGATCGTCACCCATCGCGAGCTGCCGGTGGGACACGCCCTGCGAGGGGCGCTCGCCGAGTTGTCCAGACTTGGACATGTGCGAGCGTTGCCGCTGGAGGGGCTGAAACGAACAGAGGTCGAGCTTCAGGCTGCGGCTCTGAGCGGCGTGCCGCCCACTCGCGAGCAGACAGACGAGCTCATGAGGCTCACGGCGGGAAATCCTCTCTACGTCGAGGCAGCCGTCGATCTAATGTTGCATGCGGAGTCGAGCGCGTCGCGGACTCGGGACGTCCTGCTCGCGCCAGTCGAACGTCTGCCAGAAGATTCCCAGCTGATGCTCCGCGTGGCGGCCGTCGGAGGCGCCACCGTGCAGCACGCCGCGCTCTCGCGTGTCTCGGGGATGGACGACGCCGCGCTCGAGCGCGCCCTTCGCCCAGCGGTGGACAGCAGGCTTCTCGTGGTCACGCGCGACGGGTACAGGTTCCGCCATGACCTCATCGGCACCCTCGTGTACGACCAGATGCTTCTCCCGGGAGAGAGGACGCGGCTGCACCGCGCGTTCGCGCAAACGATCGGCCAGAGTCCTGAGCTCGCGCCACCCGTGATGTGCCACGCCGCAGGTGAAGTCGCCCGCCATTGGAAGTCAGCCGGGGAGCCGCTCCTTGCCTTGGCAGCCACCTGGCAGGCGGCGCAAGAGGGGCGGAACCTGCTCGCGCACCCAGAGCGCCTGCAGATGCTGCAGGGCGTCCTAGAGCTTTGGGCCATGGTTGACGACCCAGGGGCCGTAATTGGAGTCAGTCGGGCTGTAGTGCTTCACGACGCGGTCGAGGCTGCCGAAGAGAGCGGGGACTGCGAACTCGGCCTCGCCTTCGCCGGCGACGCGCTCGCGGCCGCCGTTCGCGACGGGGATGAAATGCTCGCGGCGGCCGTGCTCGAGCGCCGCTCCCGTCTTCGTGCCCAGATGGGGATCGCCGGGTCCGCGGCAGACCTGGAGGAAGCGCTCAATCTGCTGCCGGGCGGGCCTTGCCCCCTCCGCGGCAGGCTCATGGCACAACTCGCGGATCGTCTTCGATTTGACGGCGACCCAGAGCGGGCCGATGCGATCGCCGAAGAGAGCCTCGCCGCCGCACAACTGGCGGATGACGAGTACGGGCGAATCAGGGCCACGTTGGCGAAGCTCAGCACCCTCGCGGAGCGGGACAGCCAGTCCGCGCGCGATGGCTGGTTTTGGCATGCGAAGCAGCGTCGTCTCTCGGCAGCCCCGTGCTGGAGGCGGCCGCGGCCTTCGCCTTGGCCGATGCGGCTTCCACGACAGGCGACAAGGCAGCCGCGGCGGACGTAG
PROTEIN sequence
Length: 642
MRATRHEHGAPRREDETIGHASEQASASAHRSVPFVGRRAAVETLADAVRGSSDQGECPVVLVSGDPGIGKTTLISQLPRMVPGPRYLVGRCMDFGEAPSYAPFAGILRELVRGDGLAGLRRELAPSVASALAWLLPDFDEPLPPDPGTRTRMFDAFLSLLEHLARSSPVVLVVEDVHWADQSTWDLLIFVIGNAADVPMTTIVTHRELPVGHALRGALAELSRLGHVRALPLEGLKRTEVELQAAALSGVPPTREQTDELMRLTAGNPLYVEAAVDLMLHAESSASRTRDVLLAPVERLPEDSQLMLRVAAVGGATVQHAALSRVSGMDDAALERALRPAVDSRLLVVTRDGYRFRHDLIGTLVYDQMLLPGERTRLHRAFAQTIGQSPELAPPVMCHAAGEVARHWKSAGEPLLALAATWQAAQEGRNLLAHPERLQMLQGVLELWAMVDDPGAVIGVSRAVVLHDAVEAAEESGDCELGLAFAGDALAAAVRDGDEMLAAAVLERRSRLRAQMGIAGSAADLEEALNLLPGGPCPLRGRLMAQLADRLRFDGDPERADAIAEESLAAAQLADDEYGRIRATLAKLSTLAERDSQSARDGWFWHAKQRRLSAAPCWRRPRPSPWPMRLPRQATRQPRRT*