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PLM1_60_b1_redo_sep16_scaffold_2568_16

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 14072..15217

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor containing a TPR repeat domain Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V8B6_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 380.0
  • Bit_score: 631
  • Evalue 4.30e-178
Putative RNA polymerase sigma factor containing a TPR repeat domain {ECO:0000313|EMBL:EID56369.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 380.0
  • Bit_score: 631
  • Evalue 6.00e-178
Uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 381.0
  • Bit_score: 594
  • Evalue 2.10e-167

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Taxonomy

Saccharomonospora xinjiangensis → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGGACGAACTGCTGCTGCGGGAGGTGACTCCCGCGGTGATCGGCGTCCTCGTGCATCGCGGAGTTGACTTCACGACGGCCGAGGACGCCGTGCAGGAAGCACTCCTCCAGGCCGCGCTGACCTGGCCGGACCAGCAGCCCGCCGACCCGAAGGGCTGGCTGGTCACGGTTGCCTGGCGCAAGTTCCTCGACGCCCACCGCGCCGAGGCCTCACGTCGCGACCGGGAGCAGCGGGTCGAGGTCGAGCCGCCGCCCGGACCGACCGAGACCGCAGACGACACGTTGCAGCTCTTCTTCCTGTGCGCCCATCCGTCGCTGACCCCGGCCTCCGCGGTGGCCCTCACGCTGCGCGCCGTCGGTGGCTTGACCACCCGGCAGATCGCCCAGGCCTACCTCGTGCCGGAGGCGACAATGGCGCAGCGGATCAGCCGAGCCAAACGCACGGTCCGTGACGTGCGGTTCGATCAGCCAGGCGACCTGGCGACCGTGCTACGGGTGCTCTACCTGGTCTTCAACGAGGGCTACACCGGCGACGTCGACCTGGCGGCCGAGGCGATCCGGCTCACCCGGCAGTTGGCGTCGATGACCGATGACGAGGAGACCGCGGGGCTGCTGGCGTTGATGCTGCTGCACCACGCTCGGCGACCGGCGCGGACCCGGCGCGACGGCAGCCTGGTCCCCCTGGCCGAGCAGGACCGCTCCCGCTGGAACACCTCGCTCATCGCCGAGGGCGTCGCAGTCCTGCAGACAGCGCTGGGTCGCGACCGACTCGGCGAGTTCCAAGCACAGGCCGCTATCGCTGCCCTGCACGCCGACGCGCCGCGCGCCGAGGAGACCGACTGGGTGCAGATCGTCGGCTGGTACGACGAGCTGCTCCGGCTCACCGAGAGCCCGATCGTGCAGCTCAACCGGGCCATCGCGATCGGCGAGGCCGATGGCCCCGTGGCCGGCCTCGCGGCCTTGGCCACGGTGGACCCTGGCCTGCCCCGCCACACCGCCGCCTCGGCGTACCTCCACGAGAATGCGGGCGACCTTCTGACCGCGGCACGGTTGTATGCCGACGCCGCCCGGTCCGCCCCCAACCTCGCCGAACGTCACCACCTCACCCGGCAGGCAGCGCGGATCAATCAAGCGCTGCGTGGGTGA
PROTEIN sequence
Length: 382
MDELLLREVTPAVIGVLVHRGVDFTTAEDAVQEALLQAALTWPDQQPADPKGWLVTVAWRKFLDAHRAEASRRDREQRVEVEPPPGPTETADDTLQLFFLCAHPSLTPASAVALTLRAVGGLTTRQIAQAYLVPEATMAQRISRAKRTVRDVRFDQPGDLATVLRVLYLVFNEGYTGDVDLAAEAIRLTRQLASMTDDEETAGLLALMLLHHARRPARTRRDGSLVPLAEQDRSRWNTSLIAEGVAVLQTALGRDRLGEFQAQAAIAALHADAPRAEETDWVQIVGWYDELLRLTESPIVQLNRAIAIGEADGPVAGLAALATVDPGLPRHTAASAYLHENAGDLLTAARLYADAARSAPNLAERHHLTRQAARINQALRG*