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PLM1_60_b1_redo_sep16_scaffold_3472_7

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(5856..6866)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 Tax=Mycobacterium avium complex (MAC) RepID=H8IKP2_MYCIA similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 333.0
  • Bit_score: 543
  • Evalue 1.00e-151
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 333.0
  • Bit_score: 543
  • Evalue 2.90e-152
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AFS12371.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium indicus pranii MTCC 9506.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 333.0
  • Bit_score: 543
  • Evalue 1.50e-151

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Taxonomy

Mycobacterium indicus pranii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGGTAACCGGCGACCTGATGTCCCGGGCCCGGGCCGGGGACGGCGACGCGTTCCGAGAGCTGACCGAGCCGTACCGCCGAGAGCTACTGGTGCACTGCTACCGGATGCTCGGATCCTTCCAGGACGCCGAGGACGCGCTGCAGGACGCGCTGCTGGCCGCCTGGAAAGGCTTCGGAGGGTTCGAGGGACGCGCCTCGATCCGCACCTGGCTGTACCGGATCGCCACCAACCGGTGCCTCGACGCGCGTCGCTCGGCCAGCCGACGCCAGGCCAAGGAGTGGGACGTGCCCAATGTTGAACCGCCCGAGCCGACCCGGCTCGGCGAGGTCGTCTGGCTCGAGCCGTTTCCCGACGCCCTGCTCGAGGGTGCGATCGATGTGGCGCTCGGCCCGGAGGCCCGCTACGAGCAGACCGAAGCCATCTCCCTGGCCTTCGTGACTGCTCTTCAGGTTCTGCCGCCTCGCCAGCTCGCCGTCCTGATCTTGCGCGACGTCCTCGGATTCCACGCGAACGAGGTGGCCGACATGCTCGACTCGACCGTCGAATCGGTCAACAGCGCCCTCAAACGGGCCCGCGCCAGCCTGCAGCGCCGACAGCCGCCGGCGGCCGACCGCGAACCGCCTCCCGCCTCCGACTCACCCGCCGAGGATGCGATCGTGGCGAAGTTCGTCCGCGCGTGGGAGTCCGCCGATCTCGACGCTATGGTGGCCCTGCTGACCGACGACGTCTTCGTCTCGATGCCGCCGATGCCCTTCGAATACGAGGGCCGAGATGTCGTGGCCCGCTTCTGCGCCAGCCTCTTCGGCGCGGGCCGCAGGTTCGACCTCGTGCCGACGCGAGCCAACGGTCAGCCGGCGTTCGGCGCCTACCTGCGCGCCCCTACCGGCATCAGCCACGGGACCGGCCTGTTCGTCCTCACCCTCACCGGCGACCGGATCTGCGCCATGACCCGCTTCGACAACAGCGTGCTCCCATGGTTCGGGCTACCGCGATCGATCCCGAGCCGATAG
PROTEIN sequence
Length: 337
VVTGDLMSRARAGDGDAFRELTEPYRRELLVHCYRMLGSFQDAEDALQDALLAAWKGFGGFEGRASIRTWLYRIATNRCLDARRSASRRQAKEWDVPNVEPPEPTRLGEVVWLEPFPDALLEGAIDVALGPEARYEQTEAISLAFVTALQVLPPRQLAVLILRDVLGFHANEVADMLDSTVESVNSALKRARASLQRRQPPAADREPPPASDSPAEDAIVAKFVRAWESADLDAMVALLTDDVFVSMPPMPFEYEGRDVVARFCASLFGAGRRFDLVPTRANGQPAFGAYLRAPTGISHGTGLFVLTLTGDRICAMTRFDNSVLPWFGLPRSIPSR*