ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_3472

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3472_1
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI0003811A08
hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAC72885.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_3472_2
unknown

Not on your lists

comp(204..443)
DNA (240bp) protein (80aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003682C99
PLM1_60_b1_redo_sep16_scaffold_3472_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1144..1983)
DNA (840bp) protein (280aa)
Daunorubicin resistance transmembrane protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLR1_BLASD
drrB; Daunorubicin resistance transmembrane protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_60_b1_redo_sep16_scaffold_3472_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2048..3043)
DNA (996bp) protein (332aa)
Daunorubicin resistance ABC transporter ATPase subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF30_CONWI
daunorubicin resistance ABC transporter ATPase
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:ADB51747.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_3472_5
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3040..3459)
DNA (420bp) protein (140aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6H3E0_9ACTO
transposase
Putative transposase {ECO:0000313|EMBL:ABD13515.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_3472_6
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3643..5388)
DNA (1746bp) protein (582aa)
Putative transposase Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WE47_9ACTO
Putative transposase {ECO:0000313|EMBL:GAB92021.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_3472_7
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5856..6866)
DNA (1011bp) protein (337aa)
RNA polymerase factor sigma-70 Tax=Mycobacterium avium complex (MAC) RepID=H8IKP2_MYCIA
RNA polymerase sigma70 factor
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AFS12371.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium indicus pranii MTCC 9506.;"
PLM1_60_b1_redo_sep16_scaffold_3472_8
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7020..7598
DNA (579bp) protein (193aa)
Bifunctional deaminase-reductase domain protein Tax=Frankia sp. (strain EuI1c) RepID=E3JD59_FRASU
Deaminase/reductase {ECO:0000313|EMBL:KIZ16392.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
bifunctional deaminase-reductase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_3472_9
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8423..9238)
DNA (816bp) protein (272aa)
Daunorubicin resistance transmembrane protein Tax=Streptomyces griseoflavus Tu4000 RepID=D9XLY3_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
ABC-2 type transporter
PLM1_60_b1_redo_sep16_scaffold_3472_10
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9235..10230)
DNA (996bp) protein (332aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037FD5BB
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ63840.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
daunorubicin resistance ABC transporter ATPase subunit
PLM1_60_b1_redo_sep16_scaffold_3472_11
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10621..10821
DNA (201bp) protein (67aa)
Formate dehydrogenase, alpha subunit Tax=Saccharomonospora glauca K62 RepID=I1D1N8_9PSEU
formate dehydrogenase subunit alpha
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EIE98862.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
Displaying 11 items

View Taxonomy