ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_4117_3

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(955..1488)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Sciscionella marina RepID=UPI00037CBDDB similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 143.0
  • Bit_score: 112
  • Evalue 4.10e-22
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCH18716.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 132.0
  • Bit_score: 82
  • Evalue 4.80e-13
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 146.0
  • Bit_score: 78
  • Evalue 1.40e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGACGGGGGTCGTGGCGGCCTGGTCCGGACTGAGCTGGCGCGGACCGGAGCGGTCGCCCGTCACCACTGGGCACGGATGCTCGCTGAACGGGGCCTGACCCCGCACCACTACGGAATGCTGATGGCCCTGGCGGAGAAAGGCCCAGTCGGCCAACAACAATTCAGTGCTTTGGTCGGGATCGACCCGCGCAACGCCGTCCCCGTGATCGATTTCTTGGCCGAAGGCGGCCTCCTGACCCGCGAGATCGATCCCACCGACCGACGCCGGCGGGTCCTTTCCTTGACCGAGTCAGGGCACGACGTGGTTAGGGACCTGACCAAGACCGGAGCGGCGATCGAGCGTCGGTTCCTTCGGTTGCTGACCCCGGCGGAGCAGGCGGATTTACGTCGCATGCTGCTGGTCCTGCTGCCCTCGAACCTCAACGACGACCCGAACACCGAACGAATAACCCGTGCCCAGCCGGCGGAAGCCGATGTCGCGCCAGCGGCAGCGGGAAATCCGGCCAGGTCGGGCGGTCTCCGCCGCGGTTAG
PROTEIN sequence
Length: 178
MDGGRGGLVRTELARTGAVARHHWARMLAERGLTPHHYGMLMALAEKGPVGQQQFSALVGIDPRNAVPVIDFLAEGGLLTREIDPTDRRRRVLSLTESGHDVVRDLTKTGAAIERRFLRLLTPAEQADLRRMLLVLLPSNLNDDPNTERITRAQPAEADVAPAAAGNPARSGGLRRG*