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PLM1_60_b1_redo_sep16_scaffold_4117

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_4117_1
unknown

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_4117_2
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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358..828
DNA (471bp) protein (157aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00035F2654
Uncharacterized protein {ECO:0000313|EMBL:EWM64317.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_4117_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(955..1488)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00037CBDDB
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCH18716.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
MarR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_4117_4
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1919..2608
DNA (690bp) protein (230aa)
Methyltransferase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W6Y0_9ACTO
Methyltransferase {ECO:0000313|EMBL:CDO05640.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
methyltransferase
PLM1_60_b1_redo_sep16_scaffold_4117_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2788..3384
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6C3_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83836.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_4117_6
Mycobacterium ulcerans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3570..3896
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HRL2_MYCMM
glutaredoxin-like protein
Uncharacterized protein {ECO:0000313|EMBL:ABL03288.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium ulcerans (strain Agy99).;"
PLM1_60_b1_redo_sep16_scaffold_4117_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3991..4779)
DNA (789bp) protein (263aa)
NAD-dependent epimerase/dehydratase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THZ1_9CHLR
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EFH90961.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Uncharacterized protein ycf39
PLM1_60_b1_redo_sep16_scaffold_4117_8
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5066..6022
DNA (957bp) protein (319aa)
hypothetical protein Tax=Gordonia kroppenstedtii RepID=UPI00035FB27F
RNA polymerase sigma24 factor {ECO:0000313|EMBL:EXU87730.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
ECF subfamily RNA polymerase sigma factor
PLM1_60_b1_redo_sep16_scaffold_4117_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6077..7918)
DNA (1842bp) protein (614aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003819029
Glycoside hydrolase family 15 {ECO:0000313|EMBL:ETK32744.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glycoside hydrolase 15-like protein
PLM1_60_b1_redo_sep16_scaffold_4117_10
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8028..8618)
DNA (591bp) protein (197aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI00035F6261
TetR family transcriptional regulator
Transcriptional regulator, tetR family {ECO:0000313|EMBL:ACZ21898.1}; species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
PLM1_60_b1_redo_sep16_scaffold_4117_11
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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8734..9711
DNA (978bp) protein (326aa)
alcohol dehydrogenase Tax=Glaciibacter superstes RepID=UPI0003B4F37A
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EGD43218.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
short-chain alcohol dehydrogenase
Displaying 11 items

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