ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_5033_4

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(2119..2376)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BWD9_STRBB similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 85.0
  • Bit_score: 124
  • Evalue 3.80e-26
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 85.0
  • Bit_score: 124
  • Evalue 1.10e-26
Integrase catalytic subunit {ECO:0000313|EMBL:AJT62216.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 85.0
  • Bit_score: 124
  • Evalue 5.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces lydicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGAACGGTGGGTACAGACCTGCAGGCTCGAACTCCTGGACCGCACCCTCAGCTGGAACCACGGGCATCTCCTCCATGCCCTCCACGAGGTCGAGTCGTTCTACAACGAGCACCGGCCCCACCCCGCCCTGCACAGCGCCGCGGCCCTTCACCCGCTAACCCGACCGATCATCGTTCCCGCCCAAATCGATCACCTCAAGGTCAACCGACACGCCCGACTCGGCGGCATCCTTCACGACTACACACACGCAGCATGA
PROTEIN sequence
Length: 86
MERWVQTCRLELLDRTLSWNHGHLLHALHEVESFYNEHRPHPALHSAAALHPLTRPIIVPAQIDHLKVNRHARLGGILHDYTHAA*