ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_5033

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5033_1
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..364
DNA (363bp) protein (121aa)
hypothetical protein Tax=Streptomyces sp. CNT372 RepID=UPI0003814E7C
Oxidoreductase {ECO:0000313|EMBL:KJY35902.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
putative oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_5033_2
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

631..1233
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SIJ6_NOCSJ
VldV {ECO:0000313|EMBL:KJK10698.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5033_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1239..2051
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8W4_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73607.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_5033_4
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2119..2376)
DNA (258bp) protein (86aa)
Integrase catalytic region Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BWD9_STRBB
integrase catalytic subunit
Integrase catalytic subunit {ECO:0000313|EMBL:AJT62216.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM1_60_b1_redo_sep16_scaffold_5033_5
unknown

Not on your lists

comp(2813..2968)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5033_6
unknown

Not on your lists

comp(2975..3268)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5033_7

Not on your lists

3400..4587
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H837_9ACTO
Putative integrase catalytic region {ECO:0000313|EMBL:AHE14814.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5033_8
unknown

Not on your lists

comp(4584..5012)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5033_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5797..6846)
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W6Y8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44767.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_5033_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6846..7829)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W6D6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44768.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_5033_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7826..8731)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W6J0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44769.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_5033_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8738..9760)
DNA (1023bp) protein (341aa)
Putative ATPase associated with various cellular activities Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9W4_9ACTO
putative ATPase associated with various cellular activities
Putative ATPase associated with various cellular activities {ECO:0000313|EMBL:AGZ44770.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_5033_13
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9786..10712)
DNA (927bp) protein (309aa)
Trypsin-like serine protease Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WA18_9ACTO
Peptidase S1 {ECO:0000313|EMBL:KHD75954.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Trypsin-like serine protease
PLM1_60_b1_redo_sep16_scaffold_5033_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11033..11332)
DNA (300bp) protein (100aa)
Transposase IS116/IS110/IS902 family protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F6J4_VERMA
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:AEB44322.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_5033_15
unknown

Not on your lists

11411..11593
DNA (183bp) protein (61aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5033_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11606..12130)
DNA (525bp) protein (175aa)
Transposase, IS116/IS110/IS902 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1P7_9ACTO
Transposase, IS116/IS110/IS902 {ECO:0000313|EMBL:CCH17744.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
transposase IS116/IS110/IS902 family protein
Displaying 16 items

View Taxonomy